Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car13g00156 ATGGCGGCTGCAGGCGGTGGCAAGTCGCTCGAGCAAACGCCGACGTGGGCTGTGGCCGTCGTCTGCTTCATCTTACTCTTCATCTCCATCATCATCGAATATATAATCCACCTCATCGGACAGTGGCTGAAGAAGAGACACAAACGAGCTTTATTTGAAGCTCTTGAGAAGATCAAATCAGAGCTTATGTTATTGGGATTCATATCGCTGCTTTTAACGGTCGGGCAAGGTCCGATCTCTGACATATGTATTCCTGAACACGTGGCTGCCACGTGGCATCCTTGTACGAAGGAGAAAGAAGCGAAGATGAATGAAGATATGGAGAAATCCGTGGAACATTTGGCTAATAATGGCCGGAGACTCCTCCATCTGAACGGAACTGGTGGAAGTTTCCGCCGGGTTTTGGCCGCGCCTGGTGGAGCCGACAAGTGTGCTGCTAAGGGATTAGTGTCGTTTATTTCCGCAGAAGGAATTCATCAACTTCATATCTTCATATTTGTGTTGGCAGTTTGTCATGTCTTGTATTGTGTCCTAACTTATGCTTTGGCTAGAGCAAAGATGAGGAGTTGGAAAACATGGGAAAAAGAAACCAAAACGGCGGAATATCAGTTCTCACACGATCCCGAGAGATTTAGGTTTGCAAGAGACACCTCGTTCGGGAGAAGACATCTGAACTTCTGGACGAAGAATTCTGCTCTAATGTGGATAGTTTGTTTCTTCCGGCAGTTTGTAAGATCGGTTCCAAAAGTTGATTACTTGACGTTACGACACGGATTTATAATGGCACATTTAGCTCCTCAAAGTCATACACAATTCGATTTCCAAAAGTACATTAATCGTTCTCTTGAAGAAGACTTCAAAGTGGTCGTGGGAATCAGCCCACCAATCTGGTTCTTCGCTGTGCTATTCCTCCTCTCAAACACACACGGTTGGAGGGCATATCTATGGCTGCCATTCATCCCATTAATCATTCTGCTGCTGATCGGGACGAAGTTGCAGGTGATCATAACGAAGATGGCGCTGAGAATACAAGAGCGCGGGGAAGTGGTGAAGGGCGTGCCGGTGGTGGAGCCTGGCGATGACCTGTTCTGGTTCAATCGCCCTCGCCTCATTCTTTATCTTATTAACTTCGTTCTCTTTCAAAACGCCTTCCAAGTTGGCTTCTTTGCTTGGACTTGGTATGAGTTCGGGTTGAATTCTTGTTTTCACGAGCATGTAGAGGATGTGGTGATCAGAATCTCAATGGGGGTGATTGTCCAAATCCTTTGCAGTTATGTAACTCTACCTCTTTATGCATTAGTTACTCAGATGGGTTCAACAATGAAGCCAACTATATTCAATGAGAGAGTGGCAGCAGCCCTTCGAAATTGGTACCACACGGCTCGAAAGCACATCAAACACAATCGTGGTTCGATCACCCCAATGTCGAGTCGACCCACCACTCCGACTCACCACATGTCACCAGTTCACCTTCTTCGACATTACAAGAGTGAGGTCGATAGCTTCCATAACTCGCCGAGAAGGTCACCTCGTGAACTTGATCGTTGGGACAATGATTCGCCTTCCCCCTCCCGTCATGCTGATGGTTCGTCCTCGTCACAACCCCACGTTGAGATGGGAAGCTATGATAAAGATCCAATTGAATCGGGTTTGACTGAAGTTAACCCTGTTCGACCGTCTCGAACGCGTACTCAACATGAGATTGATATTGGTCCTAAAGACTTT 1725 46.72 MAAAGGGKSLEQTPTWAVAVVCFILLFISIIIEYIIHLIGQWLKKRHKRALFEALEKIKSELMLLGFISLLLTVGQGPISDICIPEHVAATWHPCTKEKEAKMNEDMEKSVEHLANNGRRLLHLNGTGGSFRRVLAAPGGADKCAAKGLVSFISAEGIHQLHIFIFVLAVCHVLYCVLTYALARAKMRSWKTWEKETKTAEYQFSHDPERFRFARDTSFGRRHLNFWTKNSALMWIVCFFRQFVRSVPKVDYLTLRHGFIMAHLAPQSHTQFDFQKYINRSLEEDFKVVVGISPPIWFFAVLFLLSNTHGWRAYLWLPFIPLIILLLIGTKLQVIITKMALRIQERGEVVKGVPVVEPGDDLFWFNRPRLILYLINFVLFQNAFQVGFFAWTWYEFGLNSCFHEHVEDVVIRISMGVIVQILCSYVTLPLYALVTQMGSTMKPTIFNERVAAALRNWYHTARKHIKHNRGSITPMSSRPTTPTHHMSPVHLLRHYKSEVDSFHNSPRRSPRELDRWDNDSPSPSRHADGSSSSQPHVEMGSYDKDPIESGLTEVNPVRPSRTRTQHEIDIGPKDF 575
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 1378163 1383292 - Carg21063-RA Car13g00156 159073
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car13g00156 575 MobiDBLite consensus disorder prediction 560 575 - -
Car13g00156 575 MobiDBLite consensus disorder prediction 499 575 - -
Car13g00156 575 MobiDBLite consensus disorder prediction 499 522 - -
Car13g00156 575 Pfam Mlo family 8 495 IPR004326 GO:0006952|GO:0016021
Car13g00156 575 Coils Coil 97 117 - -
Car13g00156 575 MobiDBLite consensus disorder prediction 523 538 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car13g00156 Car20g00418 CCT
Car13g00156 Car20g00418 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car13g00156 Car-Chr13:1378163 Car17g00565 Car-Chr17:5237572 0 dispersed
Car13g00156 Car-Chr13:1378163 Car13g00158 Car-Chr13:1410225 1.82E-112 proximal
Car07g00604 Car-Chr7:3053548 Car13g00156 Car-Chr13:1378163 1.86E-12 transposed
Car01g00490 Car-Chr1:2878200 Car13g00156 Car-Chr13:1378163 3.91E-162 wgd
Car13g00156 Car-Chr13:1378163 Car20g00418 Car-Chr20:2354140 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car13g00156 K08472 - csv:101217225 1036.56