Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car13g00220 ATGGCTTCAACCATCATGTTCTTATTCTCCGGTGCCTCCGACCACCTACTCCACTCTCTCCCCTCCCTTATCTCCATCCTATTCTTCTCCTTCACGGCGGCCTTCACGGTGTTCTCCTTCTCTTTGTTCATCCTCCGCCTTAGACCCTGCTGCAACTGCCCCATCTGCCACTCCTACCTCTCCTCCACATGGCTCTCCTCCTTCCCCAACTTATCCGATTGGTACGCCCACCTCCTCTCCCACTCCCCCACCGCCACCATCACCATCCACGTCCTCTCCAACATCCTCACCGCCAACCCCGACAACGTCCACCACATCCTCAAAACCAACTTCCACAACTACCCAAAAGGCAAGCCCTTCTCCTCCATCCTCGGCGACCTCCTCGGCCAAGGCATCTTCAACGTCGACGGCCACTCCTGGACCTTCCAACGCAAAATGGCTAGCTTGGAGCTCGGCAGCCTCTCCGTCCGCTCCCACGCCTTCCACATCCTAACCTCCCAGATTCAAACAAGGCTGCTTCCGGTCCTGTGTTCGAATCACGGCATGCTGGATTTACAGGATATTTTTAAACGATTTTCTTTTGATAATATTTGTCGATTCTCCTTTGGGTTGGACCCTGGCTGTTTGAGCTTGTCTTTGCCTATTTCGGAGTTTGCTGTTGCCTTTGACTTGGCGTCTAAATTGTCGGCGGAGAGGGCTATTACGCCTTACCCTGTTATGTGGAGGATTAAGCGGCTGTTTGGATTTGGGTCGGAGAGGAAGCTTAGGGATGCTATTAAAATGGTGGATGATCTTGCCATGGAAGTCATACGCCAACGCCGGGAAATTGGATTCTCTCATCGGAATGATCTTCTCTCTAGATTCATGGCTTCCGTTGATGATGACAGATATCTTAGAGACATTGTTGTCAGCTTCCTCCTCGCCGGCCGGGACACGGTGGCGTCGGCTTTGACTAGCTTCTTCTGGCTACTATCTCAAAACCCAGAAGTGGAGGACGAGATTCTCGCCGAGTCGGATCGGGTCATGGGACCCGACCCGGACGCGGTACCCAGTTTCGACAACCTTAAAGACATGCAATATCTTCACGCAGCGGTGTACGAGAATCTGCGCCTCTTTCCACCGGTTCAGTTCGACTCCAAGTTCGCTGAGGAAGACGATATCTTGCCGGACGGCACGTTTGTTCAGAAGGGTACAAGGGTAACTTACCACCCCTACGCCATGGGTCGGATGGACCGGATTTGGGGACCCGATTGTCTCCAGTTTAAACCGGAGAGGTGGCTCAAGAATGGAAGCTTTGCACCTGTAAACCCGTTTAAATTCCCTGTTTTTCAGGCCGGTTTACGGGTTTGTTTGGGGAAGGAGTTAGCGGTGATGGACGTGAAATGTACTGTGGTGGTTTTGATTCGGAAGTTTAAGATCCGGTTGGTTGGAACTGACCGGGTTGCCCGGTTTGCTCCCGGTCTGACGGCTAGCTGGAGAGGTGGGTTGCCGGTTCGAATTGAACAAAGAACCACCAGTTAG 1521 52.73 MASTIMFLFSGASDHLLHSLPSLISILFFSFTAAFTVFSFSLFILRLRPCCNCPICHSYLSSTWLSSFPNLSDWYAHLLSHSPTATITIHVLSNILTANPDNVHHILKTNFHNYPKGKPFSSILGDLLGQGIFNVDGHSWTFQRKMASLELGSLSVRSHAFHILTSQIQTRLLPVLCSNHGMLDLQDIFKRFSFDNICRFSFGLDPGCLSLSLPISEFAVAFDLASKLSAERAITPYPVMWRIKRLFGFGSERKLRDAIKMVDDLAMEVIRQRREIGFSHRNDLLSRFMASVDDDRYLRDIVVSFLLAGRDTVASALTSFFWLLSQNPEVEDEILAESDRVMGPDPDAVPSFDNLKDMQYLHAAVYENLRLFPPVQFDSKFAEEDDILPDGTFVQKGTRVTYHPYAMGRMDRIWGPDCLQFKPERWLKNGSFAPVNPFKFPVFQAGLRVCLGKELAVMDVKCTVVVLIRKFKIRLVGTDRVARFAPGLTASWRGGLPVRIEQRTTS 506
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 2955549 2957720 - Carg28285-RA Car13g00220 159137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car13g00220 506 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car13g00220 506 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car13g00220 506 PRINTS E-class P450 group I signature 440 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car13g00220 506 PRINTS E-class P450 group I signature 450 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car13g00220 506 PANTHER CYTOCHROME P450 94C1 26 501 - -
Car13g00220 506 SUPERFAMILY Cytochrome P450 60 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car13g00220 506 Pfam Cytochrome P450 94 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car13g00220 506 Gene3D Cytochrome P450 59 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car13g00220 506 PANTHER CYTOCHROME P450 26 501 - -
Car13g00220 506 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car13g00220 506 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car13g00220 506 PRINTS P450 superfamily signature 441 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car13g00220 506 PRINTS P450 superfamily signature 450 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car06g00405 Car-Chr6:2255960 Car13g00220 Car-Chr13:2955549 0 dispersed
Car13g00220 Car-Chr13:2955549 Car14g00457 Car-Chr14:2401934 2.30E-122 dispersed
Car13g00220 Car-Chr13:2955549 Car06g00010 Car-Chr6:130725 4.26E-128 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car13g00220 K20624 - csv:101207724 816.609