Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car13g00385 ATGTGCGAACGGTTGTGGCATCAGTTCAGAGGGTTGCCATGGCTATCGCCCCCTCGCAACTTGGCTCCCAAATCGGTCCAAAAAGCCTCCCTAGCTCGCCAGAGGCTCTCACGTTGTCCCAATGGATCGCCCGAAGCTATAGGGGCAGAGCTCTTTCAGGTTGAATCCCAGTCTCATGATGCTATCTTGAAGCAGCTTTGGCACCACTCAGATACAATCTTGTGCTGCTCTGTCAAAACTAATGCGTCTCCTGTGTTCACATTTGCGAACCAAGCCGGGCTTGACATGCTTGAAACTACGCTCGTAGCTCTTCAAGATATAACGCTCGACAAGATCCTTGAGGATGCTGGTAGGAAGATACTGTGCTCAGAATTCTCCAAGATAATGCAACAGGGATTTGCATACCTTCCAGCAGGGATATGCATATCGAGTATGGGCAGGCCGGTGTCGTATGAACAGGCGATTGCCTGGAAAGTTCTGAATGATGATGATGTCCATCACTGTTTGGCTTTCATGTTTGTTAACTGGTCATTTATGTGA 540 48.89 MCERLWHQFRGLPWLSPPRNLAPKSVQKASLARQRLSRCPNGSPEAIGAELFQVESQSHDAILKQLWHHSDTILCCSVKTNASPVFTFANQAGLDMLETTLVALQDITLDKILEDAGRKILCSEFSKIMQQGFAYLPAGICISSMGRPVSYEQAIAWKVLNDDDVHHCLAFMFVNWSFM 179
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 6386083 6387675 + Carg21394-RA Car13g00385 159302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car13g00385 179 Pfam MEKHLA domain 46 178 IPR013978 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car13g00385 Car-Chr13:6386083 Car17g00717 Car-Chr17:6541955 7.81E-60 dispersed
Car13g00385 Car-Chr13:6386083 Car03g01304 Car-Chr3:9971940 4.95E-77 wgd
Car13g00385 Car-Chr13:6386083 Car07g00056 Car-Chr7:356272 1.19E-76 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car13g00385 K09338 - csv:101211318 264.618