Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car13g00387 ATGATTAATAGGGTTGCTCCTGCTTTCCTTATTCCAGTCTTGTTCTCAGTGGTTAGCATATTTCTTGGAATTTTTGTGGCAAGAAAAAACGACCCTTCAGATGGCATCACAGGATTGAGTTTGGAATCTTTTAAAGAAAATTGGAGTTCAGATTATCAGATGACGAACAGTGCTGGAATTCCTGATCCTTTAGGAAAAGTCTATTGGAATTTCAATGCATTGGTTGGTCTTTTTTTCCCTGCTGTGACGGGAATAATGGCTGGTTCTAATAGATCAGCTTCACTGAAGGATACTCAGCGTTCAATTCCTATTGGAACATTGGCTGCAACTCTGACAACAACTGCATTATATCTGGTCTCTGTGTTGTTGTTTGGAGCACTGGCAACTAGAGAGAAATTGTTGACAGACAGGCTTCTTACTGCTACGGTTGCTTGGCCTTTCCCAGCACTTATTTATGTTGGAATTATTTTATCAACCCTTGGAGCTGCCCTTCAGAGTCTGACAGGAGCCCCTCGCTTACTAGCAGCCATAGCCAATGATGATATATTGCCTATTCTAAACTATTTTAAAGTAGCAGATGGCAGCGAGCCATACTTTGCAACCCTCTTTACTGCATTTCTCTGCATCGGATGTGTGATAATTGGGAATCTTGATCTTATCACACCAACTGTAACCATGTTTTTCCTACTTTGTTATGCTGGTGTGAACTTATCCTGCTTCCTTTTGGACCTACTAGACGCTCCCAGTTGGCGTCCACGCTGGAGATTCCATCATTGGAGCCTCTCTCTTCTTGGAGCATCACTTTGTGTAGTGATAATGTTCTTGATCTCGTGGTCATTCACGATAGTGTCTCTAGCCCTTGCAAGCCTTCTATATTATTATGTATGCCTTAGAGGTAAGGCTGGGGACTGGGGTGATGGTTTCAAGAGTGCATATTTCCAACTTGCTCTTCGCAGTCTTCGTTCGCTTGGAGCTAGCCAAGTCCACCCAAAGAATTGGTATCCCATTCCCTTGATATTTTGCCGGCCATGGGGAAAGCTGCCAGAAAATGTACCCTGTCACCCTAAACTTGCAGATTTTGCAAACTGCATGAAGAAAAAAGGCCGTGGAATGTCCATATTTGTCTCCATTCTAGATGGAGATTACCATGAACGGGTTGAAGATGCAAAAGCTGCCTGCAAGCAGCTTGCTACATATATTGATTACAAACGCTGTGAAGGTGTGGCAGAGATTGTTGTGGCTCCCACAATGTCTGAAGGTTTCAGGGGGATCGTTCAGACGATGGGTCTCGGAAATCTCAAGCCAAATATTGTAGTGATGCGATATCCAGAAATATGGCGTCGTGAAAATCTAATAGAAATTCCGACTACTTTTGTTGGAATAATTAACGACTGCATTGATGCTAACAAAGCAGTTGTCATTGTTAAGGGTCTGGATGAATGGCCTAATGAATTTCAGAGGCAGTATGGAACTATCGACTTGTACTGGATTGTGAGAGATGGTGGTCTTATGCTTCTCCTCTCTCAGCTTCTCCTCACAAAGGAGACCTTTGAAAGCTGTAAGATTCAGGTGTTCTGCATTGCAGAGGAGGATTCCGACGCGGAGGGCCTCAAAGCTGATGTCAAAAAGTTTTTGTATGATCTTCGGATGCAAGCTGAGGTGATTGTTATAACGATAAAATCATGGGACACGCAAGTGGAGGGCGCGCAACCAGACGAATCGATGGAAGCCTTCACTGCTGCTCAAGGGAGGATTGCTAGTTATTTAGGTGAAATGAAGGCAGCAGCTAAGAGCAGAGGTACCACACTCATGGCTGATGGGAAGCCTGTCAGTGTGAATGAGCAGCAGGTTGGGAAGTTTCTAAATACAACTCTCAAGTTGAACTCGACGATTCTGAGATACTCGAGGATGGCTGCTGTCGTGCTCGTTAGCCTCCCGCCACCTCCTGTCGACCATCCTGCATACTTCTATATGGAGTACTTGGATTTGTTGGTTGAGAACGTGCCTCGGCTCTTGATCGTTAGAGGATACCGCAGAGACGTTGTAACTTTGTTCACTTAG 2061 44.4 MINRVAPAFLIPVLFSVVSIFLGIFVARKNDPSDGITGLSLESFKENWSSDYQMTNSAGIPDPLGKVYWNFNALVGLFFPAVTGIMAGSNRSASLKDTQRSIPIGTLAATLTTTALYLVSVLLFGALATREKLLTDRLLTATVAWPFPALIYVGIILSTLGAALQSLTGAPRLLAAIANDDILPILNYFKVADGSEPYFATLFTAFLCIGCVIIGNLDLITPTVTMFFLLCYAGVNLSCFLLDLLDAPSWRPRWRFHHWSLSLLGASLCVVIMFLISWSFTIVSLALASLLYYYVCLRGKAGDWGDGFKSAYFQLALRSLRSLGASQVHPKNWYPIPLIFCRPWGKLPENVPCHPKLADFANCMKKKGRGMSIFVSILDGDYHERVEDAKAACKQLATYIDYKRCEGVAEIVVAPTMSEGFRGIVQTMGLGNLKPNIVVMRYPEIWRRENLIEIPTTFVGIINDCIDANKAVVIVKGLDEWPNEFQRQYGTIDLYWIVRDGGLMLLLSQLLLTKETFESCKIQVFCIAEEDSDAEGLKADVKKFLYDLRMQAEVIVITIKSWDTQVEGAQPDESMEAFTAAQGRIASYLGEMKAAAKSRGTTLMADGKPVSVNEQQVGKFLNTTLKLNSTILRYSRMAAVVLVSLPPPPVDHPAYFYMEYLDLLVENVPRLLIVRGYRRDVVTLFT 686
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 6403144 6409249 - Carg21392-RA Car13g00387 159304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car13g00387 686 Pfam Solute carrier family 12 486 685 IPR018491 GO:0006811|GO:0016020|GO:0022857
Car13g00387 686 Pfam Solute carrier family 12 355 476 IPR018491 GO:0006811|GO:0016020|GO:0022857
Car13g00387 686 Pfam Amino acid permease 9 321 IPR004841 GO:0016020|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car13g00387 Car-Chr13:6403144 Car18g00473 Car-Chr18:3127310 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car13g00387 K14427 - csv:101216218 1285.01