Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car13g00454 ATGGTAGTCGAAGAGACGATCAAAGCTACATCGATGGAAGATCTTTCTAATTCCATCGCAAATCAAAACCCTAGGGGACGAGGCAATGAGGAAGATGAGGATCTTGAGGAAGGAGAGATCGTCGGCGACGACGACTTGGACTCCTCCAATTTATCGGCGGCGATAGTGCATCAGCCTCACCCTTTGGAGCACCCTTGGACCTTTTGGTTCGATAACCCATCCGCCAAGTCCAAGCAAGCCACCTGGGGTGCGTCTATCCGACCGATATATACCTTCTCTACCGTGGAGGAGTTCTGGAGTGTTTACAACAATATTCATCATCCAAGCAAATTGGCGTTGAGGGCAGATTTGTACTGCTTTAAACATAAAATTGAGCCTAAATGGGAGGATCCTGTCTGTGCGAATGGAGGGAAATGGACTGTAAACTTTTCAAGGGGCAAATCTGATAATGGCTGGCTATACACGCTGCTTGCTATGATCGGAGAACAGTTTGATTGTGGTGATGAAATTTGTGGAGCTGTTGTCAACGTTAGATCTGGGCAGGATAAAATATCGATTTGGACTAAGAATGCTTCCAATGAAGCGGCGCAGGCGAGCATTGGGAAGCAGTGGAAGGAGTTTCTTGATTACAATGACAGCATTGGCTTTATATTCCACGACGATGCAAAGAAGTTTGACAGGCATGCGAAGAACCGATATACGGTGTAA 708 46.47 MVVEETIKATSMEDLSNSIANQNPRGRGNEEDEDLEEGEIVGDDDLDSSNLSAAIVHQPHPLEHPWTFWFDNPSAKSKQATWGASIRPIYTFSTVEEFWSVYNNIHHPSKLALRADLYCFKHKIEPKWEDPVCANGGKWTVNFSRGKSDNGWLYTLLAMIGEQFDCGDEICGAVVNVRSGQDKISIWTKNASNEAAQASIGKQWKEFLDYNDSIGFIFHDDAKKFDRHAKNRYTV 235
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 6919246 6922673 + Carg19909-RA Car13g00454 159371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car13g00454 235 MobiDBLite consensus disorder prediction 10 25 - -
Car13g00454 235 Pfam Eukaryotic initiation factor 4E 61 213 IPR001040 GO:0003723|GO:0003743|GO:0006413
Car13g00454 235 Gene3D RNA Cap, Translation Initiation Factor Eif4e 51 235 IPR023398 -
Car13g00454 235 MobiDBLite consensus disorder prediction 1 36 - -
Car13g00454 235 SUPERFAMILY eIF4e-like 56 231 IPR023398 -
Car13g00454 235 ProSitePatterns Eukaryotic initiation factor 4E signature. 116 139 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Car13g00454 235 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 3 235 IPR001040 GO:0003723|GO:0003743|GO:0006413
Car13g00454 235 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E-1 3 235 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car13g00454 Car18g00418 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car13g00454 Car-Chr13:6919246 Car17g00127 Car-Chr17:774068 1.56E-64 dispersed
Car13g00454 Car-Chr13:6919246 Car18g00418 Car-Chr18:2620258 4.14E-162 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car13g00454 K03259 - csv:101206312 458.373