Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car13g00463 ATGACATCGGGGACGAGAATGCCCACTTGGAAGGAGAGGGAGAACAACAAGCGCCGTGAGAGGCGCCGACGTGCCATCGCCGCTAAGATCTTTCTCGGCCTGCGAATGTATGGAAACTATAAGCTTCCCAAGCACTGCGATAATAATGAGGTCCTCAAAGCCCTCTGCGTTGAAGCTGGGTGGACTGTAGAGGAAGACGGCACTACCTATCGGAAGGGATGCAAGCCTGTGGAACGCGATATCATGGGCGGATCAGCTTCTGCAAGTCCATGTTCATCTTATCAGCCGAGCCCATGTGCATCTTATAACCCAAGTCCTGCGTCTTCTTCCTTCCCAAGCCCTTCCCGTTACGCCATTAAAGGCAATGACAATGCTGCTGATCCCAATTCCCTCATCCCATGGCTGAAGAACCTCTCCTCAGCTTCATCACCAGCCTCCTCCAGGCTGCCTCACCATCTTTATATTACTGGTGGCTCCATAAGTGCACCTGTTACCCCTCCGTCGAGCTCCCCAACTGCTCGAACACCCAGAAAACCAAATGATTGGGACAATCATCCAGCAGTTGCTCCTGCTTGGGCTGCACAGCGCTTCTCATGTTTGCCTGCATCGACCCCTCCGAGCCCTGGGCGTCAGATGTTGGCTGATTCAGCATGGCTTGATAGTATGCGGATTCCTCAAAGTGGACCATCGTCACCAACCTTCAGCCTTGTGGCTAGGAATCCTTTTGGATTTAAGGAGGCAATGTCTGCTGGAGGTCCTTCATTCGGATTTAAGGAGGCAATGTCAAATCCAATGTCTGCTGGAGGGTCTCGTAATTGGACTCCTACACAGAGCGGGACGTGCTCACCCACGGTTGCTGCGGGCACCGATCATACTTCAGATGTTCCTATGACGGATGGGACTGCAGCGGAGTTTGCCTTCGGAAGTTGTTCGATTGGGTTGGTGAAGCCTTGGGAAGGAGAGAGAATTCATGAGGAATGCATCTCTGATGATCTCGAACTTACACTTGGGAATTCAAGGACGAGGTAA 1029 52.28 MTSGTRMPTWKERENNKRRERRRRAIAAKIFLGLRMYGNYKLPKHCDNNEVLKALCVEAGWTVEEDGTTYRKGCKPVERDIMGGSASASPCSSYQPSPCASYNPSPASSSFPSPSRYAIKGNDNAADPNSLIPWLKNLSSASSPASSRLPHHLYITGGSISAPVTPPSSSPTARTPRKPNDWDNHPAVAPAWAAQRFSCLPASTPPSPGRQMLADSAWLDSMRIPQSGPSSPTFSLVARNPFGFKEAMSAGGPSFGFKEAMSNPMSAGGSRNWTPTQSGTCSPTVAAGTDHTSDVPMTDGTAAEFAFGSCSIGLVKPWEGERIHEECISDDLELTLGNSRTR 342
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 6967221 6969815 - Carg19900-RA Car13g00463 159380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car13g00463 342 MobiDBLite consensus disorder prediction 158 186 - -
Car13g00463 342 Pfam BES1/BZR1 plant transcription factor, N-terminal 3 139 IPR008540 -
Car13g00463 342 MobiDBLite consensus disorder prediction 1 21 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car13g00463 Car18g00409 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00704 Car-Chr3:6143695 Car13g00463 Car-Chr13:6967221 1.47E-45 dispersed
Car04g00615 Car-Chr4:3523205 Car13g00463 Car-Chr13:6967221 1.75E-134 dispersed
Car07g00444 Car-Chr7:2261078 Car13g00463 Car-Chr13:6967221 2.96E-49 dispersed
Car12g00460 Car-Chr12:2902675 Car13g00463 Car-Chr13:6967221 1.59E-40 dispersed
Car13g00463 Car-Chr13:6967221 Car16g00394 Car-Chr16:2419196 4.95E-127 dispersed
Car13g00463 Car-Chr13:6967221 Car18g00409 Car-Chr18:2553612 4.78E-161 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4532 PF05687 BES1_N 5.90E-65 No_clan Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car13g00463 - - csv:101204637 535.413