Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car13g00468 ATGGATGATGTTACCTTCAACAATAACCACCAATTCTATTCTGTTGATCTCTTAGAAGATAGCGAGGAATTCAAGGCAGCCCCTGATTCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTGCCTCCTAATTCCACCGCCACCAAGAAGGGCAGAAGAGGGATGAAGAAGAAAGTGGTGTCGGTGCGGATTAATGGCGACGGCCCAAGGAATTCCTCTGGTTCTACGACTCCACCCTCTGATTCTTGGGCCTGGAGAAAGTACGGCCAAAAGCCCATCAAGGGCTCCCCTTATCCCAGGGCGTATTATAGGTGTAGTAGCTCCAAGGGATGTCCGGCGAGGAAGCAAGTAGAGAGGAACCGGCTTGATCCGACCATGTTGCTCATTACTTATTCCTGCGAGCATAACCATTCCGGTCCGGTTTCCAGAAACAACAATCACCACCAAGCCGCCGCCGTGAAACCCACTTCGCCAGAGACGGTTCCGGTTCATCCAGAACCGGAACCGGAGGCGGAAGAGAAATTTGTGGAGTCGTTAGAGGACCAGTTCAGCTGGTTTGGGGAAATGGAAACCACGTCGTCCACAGTGCTCGAAAGCTCCATTTTCTCGGGGAGATCATCCAGCGGAGTGGGAGATTCGATTTCCAGTGACGTGGCAATGCCTTTTCCGATGGGGGATGATGACGTGGACGACTCTCTCTTTGCGGATCTCGGGGAGTTGCCGGAGTGCTCTGTCGTGTTCCGACACGGCGGAGGCCCGGGATTACCAGTCGATGAACAACCGCCTACAAGCCAGCGGCGGATCACTCCTTGGTGCGGAGCCACCACTTGA 828 54.35 MDDVTFNNNHQFYSVDLLEDSEEFKAAPDSPPPPPPPPPLPPNSTATKKGRRGMKKKVVSVRINGDGPRNSSGSTTPPSDSWAWRKYGQKPIKGSPYPRAYYRCSSSKGCPARKQVERNRLDPTMLLITYSCEHNHSGPVSRNNNHHQAAAVKPTSPETVPVHPEPEPEAEEKFVESLEDQFSWFGEMETTSSTVLESSIFSGRSSSGVGDSISSDVAMPFPMGDDDVDDSLFADLGELPECSVVFRHGGGPGLPVDEQPPTSQRRITPWCGATT 275
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 6993847 6994817 - Carg19895-RA Car13g00468 159385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car13g00468 275 MobiDBLite consensus disorder prediction 1 15 - -
Car13g00468 275 MobiDBLite consensus disorder prediction 250 275 - -
Car13g00468 275 ProSiteProfiles WRKY domain profile. 79 139 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car13g00468 275 MobiDBLite consensus disorder prediction 1 86 - -
Car13g00468 275 MobiDBLite consensus disorder prediction 138 152 - -
Car13g00468 275 MobiDBLite consensus disorder prediction 65 82 - -
Car13g00468 275 MobiDBLite consensus disorder prediction 261 275 - -
Car13g00468 275 MobiDBLite consensus disorder prediction 138 172 - -
Car13g00468 275 MobiDBLite consensus disorder prediction 27 44 - -
Car13g00468 275 Pfam WRKY DNA -binding domain 80 136 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car13g00468 Car18g00406 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car11g01591 Car-Chr11:12599502 Car13g00468 Car-Chr13:6993847 9.46E-45 dispersed
Car13g00468 Car-Chr13:6993847 Car18g00494 Car-Chr18:3548231 1.44E-34 dispersed
Car13g00468 Car-Chr13:6993847 Car18g00406 Car-Chr18:2515409 1.67E-99 wgd
Car13g00468 Car-Chr13:6993847 Car19g00794 Car-Chr19:8597545 3.66E-46 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4534 PF03106 WRKY 8.00E-25 CL0274 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car13g00468 - - csv:101203902 376.711