Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car13g00472 ATGATGGTTTCTGATGTTCCCATTTGCCACACTTGTGGTGAGCCAGTCGGTGTTGATGCCAATGGAGAGGCATTCGTTGCCTGCCATGAGTGCCATTTTCCTATTTGCAGAGTCTGCGTTCAGTATGATATTAAGGAAGGCAGAAATGTTTGCTTGCGTTGTGGGTCTCCATTTGACGAGAACTTGCTGATGGATGCTGATACGAAGAGATCAGGAGATGAAAACACAATGGCATCTCATCTCAGTCATTCACAGGACGTTGGAGTTCACGCTAGACATATCAGCAGTGTGTCAACAGTGGATAGTGAATTGAATGATGAATCTTGGAACCCAATTTGGAAGAACAGAGTAGAGAGTTGGAAGGATAAGAAGAATAAAAAGAAAAGGCCTACCGTGAAGACTGAACAGGAAGCTCAAATTCCTCCCCAACAACAAATGGAAGAGAAACAGATTTCAGAGGCGGCTGCGGTTACACACACATTTTCTTCAGTTTATCCAATTCCATCCAGTAGATTAACACCATACAGAATTGTGATAATCATGAGATTGATCATTCTAGCTCTTTTCTTCCAGTATCGAATAACAAATCCTGTTGATAGTGCTTTTGGTCTATGGCTTACTTCTATCATATGCGAAATCTGGTTTGCCTTCTCATGGGTGTTGGATCAGTTCCCTAAATGGTCTCCCGTGTGCAGAGACACATTCATTGACAGATTATCGGCCAGGTTTGAAAGAGAGGGAGAACCTTCCCAGCTTGCTGCTGTGGACTTTTTTGTGAGTACCGTTGATCCATTGAAAGAACCTCCACTAATCACTGCCAATACCGTGCTTTCAATCCTTGCTGTGGACTATCCTGTCGATAAAGTTTCCTGCTACGTGTCTGACGATGGTGCAGCTATGCTCACATTTGAATCTCTTGTTGAGACAGCCGACTTTGCAAGAAAGTGGGTTCCATTCTGCAAGAAATTTTCCATTGAACCCCGAGCTCCTGAGTTTTACTTCTCACAGAAAATAGACTATTTGAAAGATAAAGTGCAACCTTCTTTTGTCAAGGAACGTAGAGCAATGAAAAGAGCTTATGAAGAGTTTAAAGTACGAGTCAATGCTTTGGTAGCAAAGGCTCAGAAAACGCCAGATGAAGGCTGGTTCATGCAAGATGGAACAGCTTGGCCTGGAAATAATCCACGTGACCACCCTGGAATGATTCAGGTTTTTCTTGGCAATACTGGCGCCCATGACATAGAGGGTAATGAACTTCCTCGACTAGTCTATGTCTCCAGAGAGAAAAGGCCTGGTTACCAACATCACAAAAAAGCCGGCGCTGAAAATGCTCTGGTAAGAGTATCTGCAGTCCTCACAAACGCCCCCTTCATTCTCAATCTTGACTGTGATCACTATGTTAACAATAGCCAAGCTATACGTGAGGCAATGTGTTTCTTAATGGACCCACAAGTAGGCCGAGATGTATGCTACGTTCAATTTCCTCAGAGGTTTGATGGCATTGATCGAAGTGATCGATATGCTAATCGCAACACAGTTTTCTTTGATGTCAACATGAAAGGATTGGATGGCATCCAGGGACCAGTTTACGTGGGTACAGGTTGTGTTTTTAATAGACAGGCTCTTTATGGCTACGGACCTCCTACTATGCCTAGCTTATCTAAGACATCCTCATCATCCTGCTCTTGGTGTGGCTGCTGTGCGTGCTGTTGTCCTTCCAAGAAGATATCAAAAGACCCGACTGAGATTCAGAGAGATGTAAAAAGAGAAGAGCTTGATGCTGCAATCTTTAACCTCAGGGAAATAGATAATTATGATGAGTACGAGAGGTCCATGCTAATTTCTCAATTGAGTTTTGAGAAAACTTTTGGCTTATCTTCTGTATTTATTGAGTCGACACTAATGGAAAATGGAGGAGTTGCAGAATCTGCAAATTCATCGATTTTGATCAAAGAAGCAATTCATGTCATTAGCTGTGGTTATGAAGAGAAGACTGCCTGGGGAAAAGAGATTGGTTGGATATATGGTTCAGTCACTGAGGATATCTTAACGGGTTTCAAGATGCATTGCCGAGGATGGAGGTCCATCTACTGCATGCCCTTGAGGCCAGCATTCAAAGGATCAGCACCCATTAACCTTTCTGATCGTCTGCACCAAGTTCTTCGATGGGCACTTGGATCTGTTGAGATTTTTCTCAGTAGACATTGTCCATTATGGTATGGATTTGCAGGCGGTCGGCTCAAATGGCTCCAAAGAATGGCATACATAAACACCATTGTCTATCCCTTCACCTCCCTCCCTCTCGTTGCGTACTGCTCATTGCCTGCAATCTGCCTGCTGACAGGAAAATTTATCATACCAACGCTCTCAAACCTAGCAAGTACTCTTTTTCTGGGTCTCTTCTTGTCCATCATTCTCACAAGTGTTCTTGAGCTGCGTTGGAGTGGTGTTAGCATCGAAGATCTATGGCGTAATGAGCAATTCTGGGTCATCGGAGGCGTCTCGGCCCATCTCTTTGCTGTTTTCCAAGGATTCCTAAAGATGTTAGCTGGTGTGGACACCAACTTCACAGTTACTGCAAAGGCAGCTGACGACGCCGAGTTTGGAGAGCTATACATGGTGAAATGGACAACACTTTTGATCCCTCCTACAACTCTTATCGTTGTGAACATGGTCGGAGTCATTGCTGGATTTTCTGATGCACTAAATGGTGGATATGAAGCCTGGGGACCTCTTTTTGGCAAGGTATTCTTTGCCTTCTGGGTGATTTTTCATCTCTATCCATTCCTCAAAGGTCTCATGGGTCGCCAAAACCGGACTCCAACCATTGTTGTTCTGTGGTCTGTACTGTTGGCATCAGTTTTCTCACTTGTCTGGGTGAAGATAAACCCATTTGTGAACCAAATTGACAGCACAACCGTTGCACAAAGCTGCATTGCCATAGATTGTTGA 2952 43.9 MMVSDVPICHTCGEPVGVDANGEAFVACHECHFPICRVCVQYDIKEGRNVCLRCGSPFDENLLMDADTKRSGDENTMASHLSHSQDVGVHARHISSVSTVDSELNDESWNPIWKNRVESWKDKKNKKKRPTVKTEQEAQIPPQQQMEEKQISEAAAVTHTFSSVYPIPSSRLTPYRIVIIMRLIILALFFQYRITNPVDSAFGLWLTSIICEIWFAFSWVLDQFPKWSPVCRDTFIDRLSARFEREGEPSQLAAVDFFVSTVDPLKEPPLITANTVLSILAVDYPVDKVSCYVSDDGAAMLTFESLVETADFARKWVPFCKKFSIEPRAPEFYFSQKIDYLKDKVQPSFVKERRAMKRAYEEFKVRVNALVAKAQKTPDEGWFMQDGTAWPGNNPRDHPGMIQVFLGNTGAHDIEGNELPRLVYVSREKRPGYQHHKKAGAENALVRVSAVLTNAPFILNLDCDHYVNNSQAIREAMCFLMDPQVGRDVCYVQFPQRFDGIDRSDRYANRNTVFFDVNMKGLDGIQGPVYVGTGCVFNRQALYGYGPPTMPSLSKTSSSSCSWCGCCACCCPSKKISKDPTEIQRDVKREELDAAIFNLREIDNYDEYERSMLISQLSFEKTFGLSSVFIESTLMENGGVAESANSSILIKEAIHVISCGYEEKTAWGKEIGWIYGSVTEDILTGFKMHCRGWRSIYCMPLRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPLWYGFAGGRLKWLQRMAYINTIVYPFTSLPLVAYCSLPAICLLTGKFIIPTLSNLASTLFLGLFLSIILTSVLELRWSGVSIEDLWRNEQFWVIGGVSAHLFAVFQGFLKMLAGVDTNFTVTAKAADDAEFGELYMVKWTTLLIPPTTLIVVNMVGVIAGFSDALNGGYEAWGPLFGKVFFAFWVIFHLYPFLKGLMGRQNRTPTIVVLWSVLLASVFSLVWVKINPFVNQIDSTTVAQSCIAIDC 983
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 7010740 7017363 + Carg19891-RA Car13g00472 159389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car13g00472 983 MobiDBLite consensus disorder prediction 124 146 - -
Car13g00472 983 Pfam Zinc-binding RING-finger 7 58 IPR027934 -
Car13g00472 983 Pfam Cellulose synthase 255 973 IPR005150 GO:0016020|GO:0016760|GO:0030244
Car13g00472 983 ProSiteProfiles 4Fe-4S ferredoxin-type iron-sulfur binding domain profile. 552 581 IPR017896 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car13g00472 Car-Chr13:7010740 Car10g00420 Car-Chr10:2110337 0 dispersed
Car17g01273 Car-Chr17:9663661 Car13g00472 Car-Chr13:7010740 0 dispersed
Car13g00472 Car-Chr13:7010740 Car18g00403 Car-Chr18:2468004 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car13g00472 K10999 - csv:101208988 1920.21