Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car13g00598 ATGGGTTCCAGAGCACTGGTTTTCTTCCTCTTCCTTTCCTTTCTAGGTGCGTCTTTCAGGTATGCTGCTTCTGCAGCGCAGGATGAGCAAGACAATGGTCTGGTTATGAACTTTTACAAGGATTCATGTCCCCAAGCCGAGGATATCATCAAGGAACAAGTCAGGCTTCTCTACAAGCGCCACAAGAACACCGCTTTCTCTTGGCTCAGAAACATCTTCCACGACTGTGCTGTTCAATCCTGTGATGCATCTCTGCTGCTGGATTCCACCAGAAGGAGCCTGTCTGAGAAGGAGACAGACAGGAGCTTTGGACTTAGGAACTTTAGGTATATTGAGACTATTAAGGAGGCTTTGGAGAGGGAGTGCCCTGGAGTTGTGTCCTGTGCGGACATCCTTGTCTTGTCCGCTAGAGATGGCATTGTTTCTCTTGGAGGGCCTTATATCCCACTTAAGACAGGTAGAAGAGATGGAAGGAGAAGCAGAGCTGATATTTTGGAAGAGTATCTTCCAGATCATAATGAAAGCATGTCTGTTGTTCTTGAGAGATTTGCAGCCATGGGCATTGACACCCCTGGAGTGGTTGCTTTACTAGGAGCTCATAGCGTTGGGAGAACACACTGTGTGAAGCTGGTGCACCGGCTGTACCCGCAGGTAGACCCTGCGCTGAACCCAGGGCATGTGGAGCACATGTTGTACAAGTGTCCTGATGAGATCCCAGACCCCAAGGCTGTGCAGTACGTGAGGAACGACCGTGGCACACCCATGATTCTGGACAACAACTACTACAGAAACATACTGGACAACAAAGGGTTGCTGATAGTGGACCACCAGCTAGCCACAGACAAGAGAACGAAGCCATATGTGAAGAAAATGGCCAAAAAGCAAGACTATTTCTTCAAGGAATTCTCTAGAGCCATTACCATCCTTTCTGAGAACAACCCTCTCACTGGCACAAAGGGTGAGATCAGGAAGCAGTGCAATGTTGCCAACAAGCTGCACTGA 1002 48.7 MGSRALVFFLFLSFLGASFRYAASAAQDEQDNGLVMNFYKDSCPQAEDIIKEQVRLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRRSLSEKETDRSFGLRNFRYIETIKEALERECPGVVSCADILVLSARDGIVSLGGPYIPLKTGRRDGRRSRADILEEYLPDHNESMSVVLERFAAMGIDTPGVVALLGAHSVGRTHCVKLVHRLYPQVDPALNPGHVEHMLYKCPDEIPDPKAVQYVRNDRGTPMILDNNYYRNILDNKGLLIVDHQLATDKRTKPYVKKMAKKQDYFFKEFSRAITILSENNPLTGTKGEIRKQCNVANKLH 333
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 7746364 7748772 - Carg07546-RA Car13g00598 159515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car13g00598 333 ProSiteProfiles Plant heme peroxidase family profile. 33 330 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car13g00598 333 Pfam Peroxidase 51 293 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car03g01121 Car13g00598 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g01121 Car-Chr3:9079110 Car13g00598 Car-Chr13:7746364 1.18E-128 dispersed
Car13g00598 Car-Chr13:7746364 Car14g00179 Car-Chr14:843112 1.90E-77 dispersed
Car13g00598 Car-Chr13:7746364 Car06g00318 Car-Chr6:1750065 1.59E-135 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car13g00598 K00430 - csv:101214168 628.246