Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car13g00610 ATGGCTTCCTCATCATCCCACCTTCTTCTAACTCTTCTCATCATTATCTCACTCATCCAATCCTCCCATCAAGATTACTACACCCCAACCAAGAACAACATGAACATAATCGACTCTTGCTGGCGTTCATCCTCCAATTGGGCCAAAAACCGCCAAGCCTTAGCCAACTGCGCGGTGGGCTACGGTAAGGACGCAATTGGAGGCAAATTTGGCACCATATACGTAGTCACCGACCCATCTGACAACCCTTCAAACCCCAAATATGGAACGTTGCGTTATGGTGTGATTCAAAACAAGCCACTTTGGGTTGTGTTTGCTAAGAGCATGGTTATTGTGTTGAAGAATGAGCTGATGATAAATAGTTTCAAGACCATTGATGGACGTGGTGCTAATGTGGAGATTGCTTATGGGCCTTGCATTACGGTGCAAGGGGTTAGCCATGTTATTATACATGGAATTAGTATCCATGATTGTAAGCCTGCCAAAGCTGGGCTTGTTAGAGACACTGTCACACATGTCGGCAAACGTAGAGGCTCTGATGGTGATGCCATTTCTATATTTGCTTCTTCCCATGTTTGGATTGATCATTGTTACTTAGCTCGATCCACTGATGGTCTTATTGATATCATTCATGCTTCCACGGCTGTTACTGTCTCAAATAACTACTTCTCCCAACATGACAAGGTGATGCTGCTTGGACATAACGATGGGTTCACCGATGATAAAATTATGAGGGTCACCATTGTCTTCAACCGCTTCGGAGCTGGCCTTATCGAGAGGATGCCAAGGGTTAGGTTCGGTTACGCCCACGTAGCCAACAATCGATACGACGAGTGGAAAATGTACGCGATAGGTGGAAGTGCAAACCCCACAATCTTCAGTGAAGGAAACTACTTCGTAGCTCCCAAGAACTCAAATGCCAAACAGGTAACAAAGAGAGAGGTCAACAAAGGGTGGAATAACTGGAAATGGAGATCCTCAAGAGACGTGTTCTTGAACGGCGCTTACTTTGTGCAATCTGGGTGGGGAAGTTGCAGCCCATTCTACACAAGAGCTCAGTCCTTTCCAGTGGCTCCAGGCTCCAAGGTTCCAGCTTTGACTGCAAATTCTGGGCCACTTCGTTGCTCCATTGGCAAACGTTGCTGA 1146 46.25 MASSSSHLLLTLLIIISLIQSSHQDYYTPTKNNMNIIDSCWRSSSNWAKNRQALANCAVGYGKDAIGGKFGTIYVVTDPSDNPSNPKYGTLRYGVIQNKPLWVVFAKSMVIVLKNELMINSFKTIDGRGANVEIAYGPCITVQGVSHVIIHGISIHDCKPAKAGLVRDTVTHVGKRRGSDGDAISIFASSHVWIDHCYLARSTDGLIDIIHASTAVTVSNNYFSQHDKVMLLGHNDGFTDDKIMRVTIVFNRFGAGLIERMPRVRFGYAHVANNRYDEWKMYAIGGSANPTIFSEGNYFVAPKNSNAKQVTKREVNKGWNNWKWRSSRDVFLNGAYFVQSGWGSCSPFYTRAQSFPVAPGSKVPALTANSGPLRCSIGKRC 381
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 7838479 7840164 - Carg07558-RA Car13g00610 159527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car13g00610 381 Pfam Pectate lyase 114 299 IPR002022 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g00707 Car-Chr1:4211809 Car13g00610 Car-Chr13:7838479 9.22E-65 dispersed
Car13g00610 Car-Chr13:7838479 Car18g00198 Car-Chr18:1127035 8.98E-145 dispersed
Car13g00945 Car-Chr13:9623081 Car13g00610 Car-Chr13:7838479 1.92E-106 dispersed
Car13g00610 Car-Chr13:7838479 Car13g00617 Car-Chr13:7884129 2.43E-145 proximal
Car13g00610 Car-Chr13:7838479 Car03g00499 Car-Chr3:5130987 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car13g00610 K01728 - csv:101211379 696.041