Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car13g00641 ATGGCAGATCGGAATCCCAGCTTAAACGCAGCCCATTTCGTTGATCATCGAAGCGGTTTCTGTCCTCAGACGAAGATTTTCCATAGCCTCCGACCACCTCTCTTAATTCCGCCATTATCTCAGCCTCTCTCCGTTACCGAACACGCCCTTTCTCTCCTTCAATCGTCCCCTCCTCCTTCAAATGCCGCCGTTCTCGTCGACTCCAACTCTGGTGTGCATCTCTCCTATGCCATTTTCCTCCGTCAAATACGAACACTCGCCTCTAATCTTAAAGCGTTAACCTCACTCTCCAATGGTCAAGTGGCTTTTATTCTCGCACCGACTTCTTTGGAAGTCCCTGTGTTGTATTTTGCTCTGTTATCTCTCGGTGTTGTTATCTCTCCGGCTAATCCGATTGGTTCCGATTCGGAGATTTCTCATCAGATTCGACTCAGTGAACCGGTCATTGCCTTCGCTACATCCTCGACGGCGTCCAAGCTCCCCAAGCTTCCACTCGGCACCGTCCTGATCGATTCTCCTGCGTTTCTCTCCATGATGACCGAAATCAATAGATCTGATGGTCTTGCCGACGTCAAAGTCGATCAATCCGACTCGGCGGCAATCCTGTACTCGTCAGGAACGACAGGACGAGTGAAAGGCGTGTTACTGAGTCATCGAAACCTTATTGTGGTGAACTCTAGTCCTAATCCTCTTCTATCTGAGGTCAACAACGGAGAGACGGAGCCACGTCGGGTGTCTCTGTGTCTGTTGCCTCTGTTCCATGTTTTCGGATTCGTCATGTTGCTTCGAGCGATTTCACGAGGAGAAACATTGGTTCTGATGCAAAAATTCGACTTCGTGGAGATGCTATCAGCAGTAGAGAAGTTTAGAGTTACGTACATCCCAGTTTCTCCGCCGCTAGTGGTGGCGATGGCCAAGTCGGAACTGGTGGCGAAATACGATCTCAGTTCTCTTCAAGTTTTGGGGTGCGGCGGCGCTCCTCTTGGGAAAGAAGTCATCGAGAAATTCCATCAGAAATTGCCCAAAGTTGAAATTATCCAGGGATATGGGTTGACAGAGAGTACAGCGGGGGCAGCAAGAAGTATGGGGCCCGAGGAAAGCAGCAACACGAAGTCAGTAGGCCGCCTATCTGAAAATATGGAAGCCATGATTGTGGATCCTGATTCTGGAGAGGCCTTGCCTCCTGGCCATAGAGGAGAGCTTTGGCTGCGAGGTCCAGGAATCATGAAAGGTTATGTAGGAGATGCCAAGGCAACTACCGAAACCCTGCATCCAGATGGATGGCTAAAGACTGGTGATCTTTGCTATTTTGATTCCGATGGATTCCTCTACATTGTTGACAGATTAAAAGAATTGATCAAGTACAAGGCTTATCAGGTCCCACCTGCAGAATTGGAACATTTGCTTCAATCCAACCCTGAAATCATTGACGCTGCTGTGATACCCTATCCCGATGAAGATGCTGGAGAGATTCCTATGGCTTACGTTGTTAGAAAGCCTGGAAGCAATATCACTGAGGCTCAAGTTATTGATTTCATTGCTAAACAGGTTGCACCGTACAAGAAAATTCGACGAGTTTCGTTTATCGACGCGATCCCGAAATCGCCTGCAGGGAAGATTCTGAGGAGGGAGCTGACCCAACATGCTCGCTCTCATGGTTCTAATAAGCTCTAA 1674 48.63 MADRNPSLNAAHFVDHRSGFCPQTKIFHSLRPPLLIPPLSQPLSVTEHALSLLQSSPPPSNAAVLVDSNSGVHLSYAIFLRQIRTLASNLKALTSLSNGQVAFILAPTSLEVPVLYFALLSLGVVISPANPIGSDSEISHQIRLSEPVIAFATSSTASKLPKLPLGTVLIDSPAFLSMMTEINRSDGLADVKVDQSDSAAILYSSGTTGRVKGVLLSHRNLIVVNSSPNPLLSEVNNGETEPRRVSLCLLPLFHVFGFVMLLRAISRGETLVLMQKFDFVEMLSAVEKFRVTYIPVSPPLVVAMAKSELVAKYDLSSLQVLGCGGAPLGKEVIEKFHQKLPKVEIIQGYGLTESTAGAARSMGPEESSNTKSVGRLSENMEAMIVDPDSGEALPPGHRGELWLRGPGIMKGYVGDAKATTETLHPDGWLKTGDLCYFDSDGFLYIVDRLKELIKYKAYQVPPAELEHLLQSNPEIIDAAVIPYPDEDAGEIPMAYVVRKPGSNITEAQVIDFIAKQVAPYKKIRRVSFIDAIPKSPAGKILRRELTQHARSHGSNKL 557
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 8005520 8009283 - Carg07589-RA Car13g00641 159558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car13g00641 557 Pfam AMP-binding enzyme 61 455 IPR000873 -
Car13g00641 557 Pfam AMP-binding enzyme C-terminal domain 464 539 IPR025110 -
Car13g00641 557 ProSitePatterns Putative AMP-binding domain signature. 201 212 IPR020845 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car13g00641 Car18g00217 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car09g00060 Car-Chr9:292585 Car13g00641 Car-Chr13:8005520 5.53E-155 dispersed
Car13g00641 Car-Chr13:8005520 Car18g00217 Car-Chr18:1225556 0 dispersed
Car13g00640 Car-Chr13:8004455 Car13g00641 Car-Chr13:8005520 3.59E-09 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car13g00641 K01904 - csv:101213796 890.952