Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car13g00669 ATGGGTTGCGTTCTTGGCAGACAAGCCGCCGACGGTCGCCGGAGCGCATCCGGACCTCCTCGTCGACACCGGAGTACGGATCACCACTCTCATAGCGATGGAGTTAATGGTGAGAAAGTTAAGAAAGAAACGACTGTTTATGATTGTTTTTTCGCTTTTTATCTCGATTCAATAGTTGTAGAAAGTTTGTGTGATTTTTGGTTCTTGGTGATTCAGATTGGGCAAGGGACGTATAGCAATGTGTACAAGGCGAGGGATCTTATTACTGGGAAAATTGTTGCTCTGAAGAAGGTTAGGTTTGATAATTTAGAACCAGAGAGCGTAAGGTTTATGGCCAGAGAGATTTTGGTCCTGAAATGCCTCGATCATCCCAATGTGCTTAAGCTTGAAGGCTTAGTTACTTCGAGAATGTCGTGTAGTCTTTACTTAGTGTTCGAGTATATGGAACACGACCTCGCCGGACTTGCTGCCGGTCAAGGAGTCAAGTTCACGGAACCTCAGGTCAAATGCTACATGAAGCAACTATTGTCCGGGCTTGAGCACTGTCACAACCGAGGTGTTTTGCATCGTGATATAAAGGGTTCCAATTTGCTAATTGATAACGAAGGAGTACTGAAAATAGCTGATTTTGGGTTAGCTACTTTCTTTGATCCTGAGCAGAAGCAGAATATGACTAGTCGAGTTGTAACGCTTTGGTACCGCCCACCTGAACTATTGCTTGGAGCTACTCTTTATGGTATAGGGGTTGATCTTTGGAGTGCTGGCTGCATCTTGGGCGAGCTGCTTGCTGGGAGGCCAATCATGCCAGGAAGGACAGAGGTCGAACAACTTCATAAGATATTTAAATTATGTGGTTCTCCATCTGAGGATTACTGGAAGAAGTACAAATTGCCAAATGCAACTCTGTTTAAACCCCAGCAACCATACAAACGCTGCATTGTGGAAACGTTCGAAGATTTTCCATCTTCGTCTCTACCCCTTATCGAATCTCTCCTTTCAATGGACCCCGACGGGCGAGGTACTGCCACTGCTGCTCTGAATAGCGAATTCTTTACAACCGAGCCTCTTGCTTGTGAACCATCAAGTCTGCCTAAATATCCTCCTAGCAAAGAATTGGATGTAAAATTGAGAGACGAGGAAGCTAGAAGGCAAAGAGGTCTAAGTGGGAAAGCAACAGCTGCTGATGGTGGTGGCAGGAGAGTAAGAGTACGCGATCGAGTTGGTCGGGCTGTCCCAGCTCCTGAAGCCAATGCAGAGATGCAATCAAACTTGGATAGGTGGAGAAATGTGACAAAAGCAAATGGTAAGAGCAAGAGCGAGAAGTTCCCCCCGCCTCATCAAGATGGTGCAGTGGGGTACCCGCCACATGAGACATCCCAGAGGAGCCATTTTTCATTTGGTGCACCTGGTACTTCCTTCAGCTCCTCAATTTTTAATTCAAAATCTGGATCTGTGAAAAGTACAGGAGCTCCTGGGGGGCCTTCTCGGAGGAAGAAAGCGGATAAAGATAACCCATCAGTGTCTTCATCTGGAAAATTCATCCGTGCACTGAAGCCATCAATCGGGTTATCCATGGATCTTTTGTTTAGAGGTAAATAG 1599 46.03 MGCVLGRQAADGRRSASGPPRRHRSTDHHSHSDGVNGEKVKKETTVYDCFFAFYLDSIVVESLCDFWFLVIQIGQGTYSNVYKARDLITGKIVALKKVRFDNLEPESVRFMAREILVLKCLDHPNVLKLEGLVTSRMSCSLYLVFEYMEHDLAGLAAGQGVKFTEPQVKCYMKQLLSGLEHCHNRGVLHRDIKGSNLLIDNEGVLKIADFGLATFFDPEQKQNMTSRVVTLWYRPPELLLGATLYGIGVDLWSAGCILGELLAGRPIMPGRTEVEQLHKIFKLCGSPSEDYWKKYKLPNATLFKPQQPYKRCIVETFEDFPSSSLPLIESLLSMDPDGRGTATAALNSEFFTTEPLACEPSSLPKYPPSKELDVKLRDEEARRQRGLSGKATAADGGGRRVRVRDRVGRAVPAPEANAEMQSNLDRWRNVTKANGKSKSEKFPPPHQDGAVGYPPHETSQRSHFSFGAPGTSFSSSIFNSKSGSVKSTGAPGGPSRRKKADKDNPSVSSSGKFIRALKPSIGLSMDLLFRGK 532
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 8163219 8166987 - Carg07619-RA Car13g00669 159586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car13g00669 532 MobiDBLite consensus disorder prediction 1 37 - -
Car13g00669 532 ProSitePatterns Protein kinases ATP-binding region signature. 73 96 IPR017441 GO:0005524
Car13g00669 532 ProSiteProfiles Protein kinase domain profile. 67 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car13g00669 532 Pfam Protein kinase domain 72 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car13g00669 532 MobiDBLite consensus disorder prediction 16 37 - -
Car13g00669 532 MobiDBLite consensus disorder prediction 458 489 - -
Car13g00669 532 MobiDBLite consensus disorder prediction 381 515 - -
Car13g00669 532 ProSitePatterns Serine/Threonine protein kinases active-site signature. 187 199 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car13g00669 Car-Chr13:8163219 Car14g01474 Car-Chr14:12256152 0 dispersed
Car18g00245 Car-Chr18:1415922 Car13g00669 Car-Chr13:8163219 1.00E-74 transposed
Car13g00669 Car-Chr13:8163219 Car18g00244 Car-Chr18:1412613 1.13E-41 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89281 PF00069 Pkinase 2.80E-65 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car13g00669 K08819 - csv:101205716 859.751