Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car13g00670 | ATGAAGACATTGCAACGACTTGTTCCTGGTTGCGACAAGGTTACAGGGAAGGCCCTGATGTTGGATGAAATTATAAATTATGTTCAGTCCCTACAAAATCAAGTTGAGTTTCTCTCCATGAAACTCGCTTCTTTGAACCCAATTTTCTTCGACTTCAGAATGGATTTGGACGGCCTTATGATTCAACCAGAGACGCCGTCGTTGAGTACTATAACGCCACAGCTTCCGGCGATGGCTCAATGCAGCGGAGCGGTGATCGACACCACCCCTCCGACCACCCCAACTCCGGCAATCTCCGCCGCAAATAACTATCCCTTAATGGACCCTTCAGCTAATAATATGTTTCTAATGAGCCCCTCCGCCTACTCCCCTTCATCTCAGGATTACGTTAAGGTTTCATCATGGGATGTCGAAGAACAGAAACGAAAGCTTCTAATTTCATCGGGAATCGGCGACAACTTGTGTTACTTCCATTGA | 477 | 46.54 | MKTLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSMKLASLNPIFFDFRMDLDGLMIQPETPSLSTITPQLPAMAQCSGAVIDTTPPTTPTPAISAANNYPLMDPSANNMFLMSPSAYSPSSQDYVKVSSWDVEEQKRKLLISSGIGDNLCYFH | 158 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 13 | 8171756 | 8172753 | - | Carg07620-RA | Car13g00670 | 159587 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car13g00670 | 158 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 1 | 31 | IPR011598 | GO:0046983 |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Car10g00020 | Car13g00670 | CCT | |
| Car13g00670 | Car18g00247 | CST |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Car13g00670 | Car-Chr13:8171756 | Car08g00218 | Car-Chr8:1369372 | 3.53E-23 | dispersed | |
| Car10g00020 | Car-Chr10:102908 | Car13g00670 | Car-Chr13:8171756 | 6.81E-24 | wgd | |
| Car13g00670 | Car-Chr13:8171756 | Car18g00247 | Car-Chr18:1434555 | 3.57E-74 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car13g00670 | - | - | cmax:111495225 | 265.774 |