Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car13g00699 ATGTCTCAGGATTTGTCATTGGATCAAGACCTGGATGAATCTGATCCCGAGTTCGTGGAGATTGATCCTACCGGTCGATATGGACGGTATACGGAAGTTTTAGGAAAAGGGGCATTCAAAAGGGTATATCGGGCTTTTGATGAGTTGGAAGGAATTGAAGTAGCTTGGAATCAGATTAAGGTAACAGATTTATTGAGGAAGTCTGATGATTTGGAGCGACTATATTCAGAAGTTCATTTGCTTAAGACATTGAAGCACAAGAACATAATCAAATTTTACAGTTCATGGGTTGATACGAAGAACGAAAACATCAACTTCATTACAGAGATATTCACTTCAGGGACACTGCGACAATATAGAAAGAAGCACAAGCATGTTGATTTGAGAGCACTGAAAAAATGGTCGAGGCAGATATTAGAGGGCCTTCTGTATCTTCATAGTCATGACCCTCCAGTTATACATAGAGATTTAAAATGTGACAATATCTTTGTCAATGGCAACCAAGGTGAGGTGAAAATCGGTGACTTAGGACTTGCTGCCATTCTTCAGCAAGCTCGTTCAGCTCACAGTGTCATTGGAACACCCGAGTTTATGGCTCCAGAGTTTTATGAGGAGGAATACAATGAACTTGTGGATATTTATGCCTTTGGCATGTGTTTGCTTGAGCTTGTAACCTTTGAATATCCATATGTTGAATGTGCCAATGCTGCTCAAATATATAAGAAGGTCAAACTCCACCTATTCTGTGAGAGTGTTGAGGCGAATCAAAGACAGTTCTCGGAATCGGATCCGCTCCTTATTCAAGGCTGCTTACCGAAAAAAGAATCCCAGAGCTGCTACTCTACCATACGACTTGCACTTTGCAGATTAGATGCACAACAAAAGGGTAATTTTCGCAATATCCATTTCCCATTTGATACTGAAGCTGACACAACAGTTTCTGTTGCTAGTGAAATGGTTGAGGAGTTGGACCTTTCTGATCAAGATGTCTCCACAATTTCTGAAATGATTGAAACAGAAATTCGATCTTACATTCCAGATTGGACATCAGTTGAGAATTCTGTGGATAATGTAGGAGTTGATGTTGCAATTTCTGATAGCTCGACGTCTGACACAAAGAATGTCTCCTCTCCATTGTCTATTGAATCTAATAATCTTGCTTTGGAGGTATTGCCTTCAGGTCGCAAGTACTGGTCGGACTCTCCAAAAGGTATTGGTGGGTGCTCTCCTATTAAGCCAGGTCCTTCAAACTTGTCTCTTACCTCAGATCAGAATGTTGAATCCTCTAGCAGCCACATACTTGGGAATAATCTTGATCATTCTGCAATAATTAAGGGACTGGAAAGTGAACTTTTGTCAGAGGGCGATATTCATGATAGCTCTGAGGCACATCTTTTAGAAGAGAACTGTTCTGATGAATCAGTTGACCTCAAAATAATGGCTGAGAAACTTAAAAATCTGTTGACACAACAACAAAAGGAATTAGATGAACTAAAGAGAGAGCATAAATTAGTTGTTTCAGAACTTCTCACTGAACTAACACCTGAATCTTGTCAGAAGGTTTTAGGGATGTGTAAGCTAAAGCGTTCTGATTTTGCCCATGAAAGCAATGAGTTAGAGCAGACAATACCTTTATTGAGCTTGAATGATGCGCTATAA 1659 39.9 MSQDLSLDQDLDESDPEFVEIDPTGRYGRYTEVLGKGAFKRVYRAFDELEGIEVAWNQIKVTDLLRKSDDLERLYSEVHLLKTLKHKNIIKFYSSWVDTKNENINFITEIFTSGTLRQYRKKHKHVDLRALKKWSRQILEGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILQQARSAHSVIGTPEFMAPEFYEEEYNELVDIYAFGMCLLELVTFEYPYVECANAAQIYKKVKLHLFCESVEANQRQFSESDPLLIQGCLPKKESQSCYSTIRLALCRLDAQQKGNFRNIHFPFDTEADTTVSVASEMVEELDLSDQDVSTISEMIETEIRSYIPDWTSVENSVDNVGVDVAISDSSTSDTKNVSSPLSIESNNLALEVLPSGRKYWSDSPKGIGGCSPIKPGPSNLSLTSDQNVESSSSHILGNNLDHSAIIKGLESELLSEGDIHDSSEAHLLEENCSDESVDLKIMAEKLKNLLTQQQKELDELKREHKLVVSELLTELTPESCQKVLGMCKLKRSDFAHESNELEQTIPLLSLNDAL 552
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 8297851 8305806 + Carg07649-RA Car13g00699 159616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car13g00699 552 ProSiteProfiles Protein kinase domain profile. 28 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car13g00699 552 Coils Coil 481 508 - -
Car13g00699 552 Pfam Protein kinase domain 32 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car13g00699 552 ProSitePatterns Serine/Threonine protein kinases active-site signature. 152 164 IPR008271 GO:0004672|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car13g00699 Car18g00187 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car13g00699 Car-Chr13:8297851 Car17g00216 Car-Chr17:1308498 3.80E-145 dispersed
Car13g00699 Car-Chr13:8297851 Car18g00187 Car-Chr18:1022231 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89285 PF00069 Pkinase 4.30E-48 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car13g00699 K08867 - csv:101206177 747.273