Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car13g00725 ATGCAGAGCTCTTCGGTCGCCTTTTCGCCTTCTCTTCCTCTTCTCAAGCCTCGGAGGCCTCATACTTCGTTCTTCAGCTCTGGATGTAACTCAATTCGATCATCTTCTTCAAATTCCAGAGATCTCAGTGACCTGAACAATGTCAGTCTTCCTTCCTCTTGGCCCCGGCGATCTTGGACTTTGTCGACTTCTCCTTTTTCGTCCTCAAAACTCCGCCCATGGACCGGCGTACCTTCGTTTGCTTCGGATTTTGATGCGAATCATTTCAAGGTTCAGGCGGCTGCGGTTCCGGAAAGCTCAGAGGAGGCCGCCAGTGCTGGCGGTAGCCTAATGAAAACGTTGGAGCTCGGATTGTTGTTTGGCCTCTGGTACCTTTTCAACATCTACTTTAACATCTTCAACAAGCAGGTCCTCAAGGTGTTTCCGTTCCCTGTAACTGTCACTGCTGTTCAATTTGCTGTAGGCACTGTACTTGTTCTTCTTATGTGGGGACTTAATCTCTACAAAAGGCCTAAGATTAGTGGCGCTCAGCTTGCTGCTGTTCTGCCGCTCGCGTTAGTTCACACATTGGGAAATCTTTTTACGAACATGAGTCTTGGGAAAGTGGCCGTATCGTTCACCCACACAATTAAAGCTATGGAGCCTTTTTTTTCAGTTATCCTGTCAGCAATGTTTCTTGGAGAGACTCCTACTCCCTGGGTTGTTGCATCCATTATACCAATTGTTGGCGGTGTTGCATTGGCATCTGCCACTGAGGCCTCCTTCAACTGGGCCGGATTTTCTAGTGCAATGGCATCCAATTTGACTAATCAATCTCGTAATGTCCTTAGCAAAAAGGTCATGGCGAAAAAAGAGGATTCAATGGACAACATCACCCTCTTTTCAATTATAACAATCATGTCCTTTTTCTTATTGTCCCCTGTTGCTGTCTTCATGGAAGGTGTCAAGGTTACTCCTGCATACTTACAATCAGCTGGATTGAACGTAAACCAAGTCTTCACTAGGTCTCTTCTTGCTGCCCTTTGTTTCCATGCATACCAACAGGTTTCTTACATGATATTGCAAAGAGTATCGCCTGTTACCCACTCAGTAGGCAATTGTGTAAAGCGTGTTGTTGTCATCGTGAGCTCTGTTATCTTCTTCCAAACACCTGTTTCTCCAATCAACTCTATTGGCACTGGAATAGCTCTTGCTGGGGTTTTCCTGTATTCAAGGGTTAAGCGCATCAAAGCCAAGCCGAAGACTGCTTAA 1251 45.96 MQSSSVAFSPSLPLLKPRRPHTSFFSSGCNSIRSSSSNSRDLSDLNNVSLPSSWPRRSWTLSTSPFSSSKLRPWTGVPSFASDFDANHFKVQAAAVPESSEEAASAGGSLMKTLELGLLFGLWYLFNIYFNIFNKQVLKVFPFPVTVTAVQFAVGTVLVLLMWGLNLYKRPKISGAQLAAVLPLALVHTLGNLFTNMSLGKVAVSFTHTIKAMEPFFSVILSAMFLGETPTPWVVASIIPIVGGVALASATEASFNWAGFSSAMASNLTNQSRNVLSKKVMAKKEDSMDNITLFSIITIMSFFLLSPVAVFMEGVKVTPAYLQSAGLNVNQVFTRSLLAALCFHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVIFFQTPVSPINSIGTGIALAGVFLYSRVKRIKAKPKTA 416
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 8397225 8400757 + Carg07675-RA Car13g00725 159642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car13g00725 416 MobiDBLite consensus disorder prediction 23 42 - -
Car13g00725 416 Pfam Triose-phosphate Transporter family 115 404 IPR004853 -
Car13g00725 416 MobiDBLite consensus disorder prediction 1 42 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car13g00725 Car18g00163 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car13g00725 Car-Chr13:8397225 Car16g00554 Car-Chr16:3501529 1.62E-64 dispersed
Car13g00725 Car-Chr13:8397225 Car18g00163 Car-Chr18:891626 0 wgd
Car13g00725 Car-Chr13:8397225 Car04g02597 Car-Chr4:20365692 7.24E-35 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car13g00725 K15283 - csv:101203848 666.381