Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car13g00740 | ATGGGGGACCGTGACGGCGGTTTCAAAGAAATAGAATCAATCGGAGAAATCGACGGCGCCGATGCTCTTTTGGCGTCTAGACGCTATGGTTGTTTTTGCTTCCCTTGCTTTGGACAAAGCCGGTCGGCTTCCGACGAACTTTCTTGGTGGGAACGGGCGAAGGCGAAAGCGAAATCGACGAAGTTCGACGGTGAGGATCATTGGTGGAGTGGAGGAATCAGATCTCTCAAGAAGCTTCGTGAATGGTCCGAGATCGTCGCTGGTCCGAGATGGAAGACCTTCATTCGCCGGTTCAATCGGAACCGGCCTGCCGCCGTGAAGCCTGGGAAATTCCAATATGATCCCATCAGTTACGCTTTGAATTTCGACGAGGGACATAACGGTGATGTGGATTTCGAAGGGGATGAATACAGCGGCGGGTTTCAACACTTCTCCGACCGGTTTTCCGCCGTGCCGGCGTCGGGGAAGTCGTCGGGCGCGGCGGTGGCTAGTTAG | 495 | 54.75 | MGDRDGGFKEIESIGEIDGADALLASRRYGCFCFPCFGQSRSASDELSWWERAKAKAKSTKFDGEDHWWSGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNRPAAVKPGKFQYDPISYALNFDEGHNGDVDFEGDEYSGGFQHFSDRFSAVPASGKSSGAAVAS | 164 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 13 | 8468553 | 8469047 | + | Carg07690-RA | Car13g00740 | 159657 |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Car11g00104 | Car13g00740 | CCT | |
| Car10g00128 | Car13g00740 | CCT | |
| Car11g00104 | Car13g00740 | ECH | |
| Car10g00128 | Car13g00740 | ECH | |
| Car13g00740 | Car18g00150 | CST |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Car10g00455 | Car-Chr10:2294093 | Car13g00740 | Car-Chr13:8468553 | 1.87E-15 | dispersed | |
| Car10g00128 | Car-Chr10:606794 | Car13g00740 | Car-Chr13:8468553 | 2.87E-42 | wgd | |
| Car11g00104 | Car-Chr11:595269 | Car13g00740 | Car-Chr13:8468553 | 2.59E-47 | wgd | |
| Car13g00740 | Car-Chr13:8468553 | Car18g00150 | Car-Chr18:815798 | 7.48E-83 | wgd | |
| Car13g00740 | Car-Chr13:8468553 | Car04g02623 | Car-Chr4:20474315 | 9.33E-29 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car13g00740 | - | - | csv:105436380 | 271.552 |