Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car13g00744 | ATGGTTGGCCATGGCAATCACAGGTTGAAACTCTCCATCTTCCACCACCGATCTTCGTCGGACTCGAAACCTGAACGGCCGGTAGAGTATCCCAGAGAGTATCTCTGCGAAATTTCCAAGTCGTTAATGGCGGATCCGGTTGTCGTCTCCTCCGGTCAGACGTTCGAGCGCCTCTGTATTCAAGTTTGTCAAGAATTGGGGTTTTCGCCGAAGCTTGAAGATGGATCGAGGCTGGATTTCACCTCTGTTATAACCAACAGAAATATGAGATTCACCATTCTCAAATGGTGCGATGACAACGGAATCGAACACCCACGACCCCCTCTGTACACCTCTATTGAACTCGTTGTTCGTCAATTAATGGAGAAGGAGAGACAAGAGAATCGATTCGAGGCTTCTGATAGCGAGTTGTTAAGAGGCGTCGCCGATAAACCGGCGGGAGTTGCAGTTCATGCGACTACGGAGGTTGGGTTCCGAGTCAACCGATTTCAACTCAACTCGCCGCCGGAAACGGAGGAGATCGTACGTGAAAGTACTATTTTGCCCTTCAAAACGCAACCCTCTTGTTACGCCGCTCATTCTTCGTCTTCCTCGAGCTTCGACAGAGGAAGTTCCGATTCGTATACACCAAATTCAGAAGAGGAATCTCGTCTCATCATGAAATTCAGAAGCGGCGATGAATGCGAACAACAAGAAGGAGTGATTTCCCTAAGAAAATTGACCAAATCCAACGAATCAACTAGGGCTTCTATATGCACAAAGGAATTCCTCGCCGCACTACTTCCTCTGGTTTCATCCAGATCTACAAATATCCAGATCAATGCCGTTGCTTCCGTCGTGAATCTCTCCCTCGAGAAATCGAACAAATTGAAGATCCTCCGAGCAGGATTCGTTCCGTCATTAATCGACGTTTTAGACAGCGGATACGCGGAATCTCAAGAACACGCAGCCGGTGCTCTGTTCAGTTTATCATTAGAGGACGAGAACAAAATGGCGATTGGAATTCTCGGCGCGTTACCGGTACTGATGAACACACTCCGATCCGAGAGTGAGCGGACGAGGAACGATTCGGCCCTTTGTTTGTACCATTTGACTCTAAACCCTAGCAACCGTGTGAAACTAGTGAAACTCGGCGCCGTTCCAATACTTCTATCGTTGACGAGAATCGACGGTTCTGCGAGCCGAATCCTGCTGATTCTATGCAATCTCGCCGTCTGTGCCGACGGAAGATCGGCGATGCTGGATGCGAACGCGGTGGATTGTTTGGTCGGGATGTTGAGGGAGAAAGAGATGGATTCCGAGTCGACTCGGGAGAATTGTGTGGTAGCGCTGCACGCATTGAGTCAAGGAGGATTCCGATTCAAGGGATTGGCGAAGGCGGCCGGCGCGGTAGAGGTTCTAAGAGAGGTTGAAGAAAGGGGAAGCGAGAGGGCGCGGGAGAAGGCCAAGAGGATCTTGGAGATGATGAGAACTGGCGGGAGCGGTTCCGTTGAGATCGAAGGCGTCCGCCGACATGGGCTCGACGCCGGTGGAGTCAGCTGGACCGGCCGGGCTGGTGCTGCCTTGAACCGGTATTCTACCAATACTACTAAGTTTTGA | 1599 | 50.72 | MVGHGNHRLKLSIFHHRSSSDSKPERPVEYPREYLCEISKSLMADPVVVSSGQTFERLCIQVCQELGFSPKLEDGSRLDFTSVITNRNMRFTILKWCDDNGIEHPRPPLYTSIELVVRQLMEKERQENRFEASDSELLRGVADKPAGVAVHATTEVGFRVNRFQLNSPPETEEIVRESTILPFKTQPSCYAAHSSSSSSFDRGSSDSYTPNSEEESRLIMKFRSGDECEQQEGVISLRKLTKSNESTRASICTKEFLAALLPLVSSRSTNIQINAVASVVNLSLEKSNKLKILRAGFVPSLIDVLDSGYAESQEHAAGALFSLSLEDENKMAIGILGALPVLMNTLRSESERTRNDSALCLYHLTLNPSNRVKLVKLGAVPILLSLTRIDGSASRILLILCNLAVCADGRSAMLDANAVDCLVGMLREKEMDSESTRENCVVALHALSQGGFRFKGLAKAAGAVEVLREVEERGSERAREKAKRILEMMRTGGSGSVEIEGVRRHGLDAGGVSWTGRAGAALNRYSTNTTKF | 532 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
13 | 8486765 | 8488363 | - | Carg07694-RA | Car13g00744 | 159661 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car13g00744 | 532 | MobiDBLite | consensus disorder prediction | 193 | 214 | - | - | |
Car13g00744 | 532 | Gene3D | - | 395 | 493 | IPR011989 | - | |
Car13g00744 | 532 | Gene3D | - | 215 | 394 | IPR011989 | - | |
Car13g00744 | 532 | ProSiteProfiles | U-box domain profile. | 29 | 103 | IPR003613 | GO:0004842|GO:0016567 | |
Car13g00744 | 532 | SUPERFAMILY | RING/U-box | 16 | 106 | - | - | |
Car13g00744 | 532 | SMART | Ubox_2 | 33 | 96 | IPR003613 | GO:0004842|GO:0016567 | |
Car13g00744 | 532 | PANTHER | U BOX DOMAIN-CONTAINING | 1 | 497 | - | - | |
Car13g00744 | 532 | SUPERFAMILY | ARM repeat | 222 | 486 | IPR016024 | - | |
Car13g00744 | 532 | MobiDBLite | consensus disorder prediction | 193 | 215 | - | - | |
Car13g00744 | 532 | Pfam | Armadillo/beta-catenin-like repeat | 327 | 365 | IPR000225 | GO:0005515 | |
Car13g00744 | 532 | Pfam | U-box domain | 31 | 100 | IPR003613 | GO:0004842|GO:0016567 | |
Car13g00744 | 532 | SMART | arm_5 | 243 | 284 | IPR000225 | GO:0005515 | |
Car13g00744 | 532 | SMART | arm_5 | 326 | 366 | IPR000225 | GO:0005515 | |
Car13g00744 | 532 | SMART | arm_5 | 367 | 405 | IPR000225 | GO:0005515 | |
Car13g00744 | 532 | SMART | arm_5 | 406 | 449 | IPR000225 | GO:0005515 | |
Car13g00744 | 532 | SMART | arm_5 | 285 | 325 | IPR000225 | GO:0005515 | |
Car13g00744 | 532 | CDD | RING-Ubox | 35 | 71 | - | - | |
Car13g00744 | 532 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 296 | 333 | IPR000225 | GO:0005515 | |
Car13g00744 | 532 | PANTHER | U-BOX DOMAIN-CONTAINING PROTEIN 38 | 1 | 497 | - | - | |
Car13g00744 | 532 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 12 | 104 | IPR013083 | - | |
Car13g00744 | 532 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 337 | 379 | IPR000225 | GO:0005515 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car13g00744 | Car-Chr13:8486765 | Car04g00936 | Car-Chr4:5378929 | 4.40E-14 | dispersed | |
Car10g00140 | Car-Chr10:669534 | Car13g00744 | Car-Chr13:8486765 | 0 | wgd | |
Car11g00114 | Car-Chr11:657657 | Car13g00744 | Car-Chr13:8486765 | 0 | wgd | |
Car13g00744 | Car-Chr13:8486765 | Car15g00301 | Car-Chr15:1625422 | 8.18E-155 | wgd | |
Car13g00744 | Car-Chr13:8486765 | Car18g00141 | Car-Chr18:771106 | 0 | wgd | |
Car13g00744 | Car-Chr13:8486765 | Car04g02629 | Car-Chr4:20494167 | 1.57E-149 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car13g00744 | - | - | csv:101221183 | 876.7 |