Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car13g00771 ATGGCGCCGGTTCTATCTCGGTTACTGTTCCGGCGGATTGTTCAGGCACCATTTCTTCGCACCTCCACCGGCTTTAGCTTTTGCAGAAATGTTCATTCTATCCCTTTCTCTTCGGTGGAAGTGGAGCAAATATCAGGTTCTAAGCCAGGAGAAGTTCATAACTTAGTGCAGGGTAAATGGATTGGATCTTCCGGTTGGAATACTATTGTAGATCCTTTAAATGGAGAACCATTTATTAAAATTGCTGAAGTTAATGAAACAGAAATTCAGCCATTTGTGAAGAGCCTGACCAAATGCCCCAAGCATGGCTTACATAATCCTTTCAAATCACCCGAGAGATATCTTTTGTATGGAGATGTATCGTCCAAGGCTGCCGGCATGCTTTCGATACCAAAGGTGACTGACTTCTTTGCAAGGTTAATTCAAAGAGTTTCTCCAAAAAGTTATCAGCAAGCTTGGGCTGAAGTCAATGTTACTGTTAAATTTTTAAGGAACTTCTCTGGTGATCAGGTTCGCTTCCTAGCAAGGTCCTTTGCAGTACCAGGAGATCATCTTGGACAACAAAGCCATGGTTACCGTTGGCCTTATGGTCCTGTAGCAATTATCACTCCTTTCAACTTCCCCTTGGAAATTCCTTTACTTCAGGTGATGGGTGCACTCTACATGGGCAACAAACCTGTTCTAAAAGTTGATAGCAAGGTTAGCATAGTTATGGAGCAAATGATTCGATTACTACACCATTGTGGTCTTCCTCTTGAAGATTTAGATTTTATAAATTGCGATGGGAAGACGATGAACAAGTTATTGATCGAGGGAAATCCATCCATGACTCTTTTCACTGGTAGCTCAAGAGTGGCAGAGAAGTTGGCTGTCGACTTAAAGGGTCGTATTAAACTGGAAGATGCAGGTTTTGATTGGAAAGTCTTAGGACCAGATGTTCGAGAGGAAGACTATGTTGCATGGGTTTGTGATCAAGATGCATATGCTTGCAGCGGCCAGAAGTGCTCGGCACAGTCCATACTGTTCATGCATGAGAACTGGTCGAAAACTTCACTCATTTCGAAGATAAAGGATCTTGCAGAGAGAAGAAACTTGACTGATTTAACGATTGGCCCTGTTCTTACGTTAACAAATGAAATGATGCTAGATCACATGAACAAATTGCTCAAGATACCAGGAGCAAAGCTACTCTTTGGAGGTGAACCTCTCAAAAACCATTCCATTCCAGCCATTTATGGCGCTATGAAACCCACTGCAGTGTATCTTCCACTCGAAGAAATGATGAAAGATGAGAATTATGAGCTTGTTACTAAGGAAATTTTTGGACCATTCCAGATTATTACTGAATATAAGAGCGATCAACTGTCAGTTGTGTTGGATGCTCTTGAGCGAATGCATGCTCATCTAACAGCAGCGGTTGTTTCAAATGACCCTCTTTTTCTACAGGAAGTTATTGGGAATACTGTAAACGGGACGACGTATGCGGGTTTACGAGCTAGAACAACAGGAGCTCCGCAGAACCATTGGTTTGGACCAGCAGGTGACCCTAGAGGTGCTGGTATTGGAACTCCAGAAGCCATCAAACTCGTATGGTCTTGCCATAGAGAGATCATATATGATATTGGCCCCTTGCCCTTGAATTGGACAACTCCACCATCTTCTTGA 1665 42.76 MAPVLSRLLFRRIVQAPFLRTSTGFSFCRNVHSIPFSSVEVEQISGSKPGEVHNLVQGKWIGSSGWNTIVDPLNGEPFIKIAEVNETEIQPFVKSLTKCPKHGLHNPFKSPERYLLYGDVSSKAAGMLSIPKVTDFFARLIQRVSPKSYQQAWAEVNVTVKFLRNFSGDQVRFLARSFAVPGDHLGQQSHGYRWPYGPVAIITPFNFPLEIPLLQVMGALYMGNKPVLKVDSKVSIVMEQMIRLLHHCGLPLEDLDFINCDGKTMNKLLIEGNPSMTLFTGSSRVAEKLAVDLKGRIKLEDAGFDWKVLGPDVREEDYVAWVCDQDAYACSGQKCSAQSILFMHENWSKTSLISKIKDLAERRNLTDLTIGPVLTLTNEMMLDHMNKLLKIPGAKLLFGGEPLKNHSIPAIYGAMKPTAVYLPLEEMMKDENYELVTKEIFGPFQIITEYKSDQLSVVLDALERMHAHLTAAVVSNDPLFLQEVIGNTVNGTTYAGLRARTTGAPQNHWFGPAGDPRGAGIGTPEAIKLVWSCHREIIYDIGPLPLNWTTPPSS 554
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 8617992 8621783 - Carg07721-RA Car13g00771 159688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car13g00771 554 Pfam Aldehyde dehydrogenase family 123 496 IPR015590 GO:0016491
Car13g00771 554 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 328 339 IPR016160 GO:0016491
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car13g00771 Car-Chr13:8617992 Car11g00103 Car-Chr11:583895 7.05E-12 dispersed
Car13g00771 Car-Chr13:8617992 Car12g00001 Car-Chr12:9331 5.63E-14 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car13g00771 K00294 - csv:101214440 1035.4