Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car13g00787 | ATGCCGCCGAGACGATATGCTTTTGGACGGGCCGATGAGGCCACCCACCCTGACTCCATTAGAGCCACCTTGGCTGAGTTCATTTCCACTTTCATCTTCGTCTTCGCCGGGGAAGGCTCTGTTCTTGCTCTTGACAAAATTTTCAGTCCAGCAGATTATGGAAGTTATGGCCATGGAGGTTACAGTCACGGTCACGGTTATGGTCGGAGGAAGACCGACACGGGCCGAGGTGCATCCGATTTAGTTGTGATAGCAATAGCGCACGCATTCGCTCTGTTCTCAGCGGTTGCAGCGAGTATCAACATCTCCGGTGGGCATGTCAATCCGGCTGTGACTTTTGGCGCTCTTCTTGGCGGGAGGATATCACTTATCCGTGGAATTTTCTATTGGGTAGCTCAAATTTTGGGTGCCATCGTCGCTTCACTGCTCTTGAGACTCGCAACCGGTGGCATGAGGCCTATGGGGTTCTTCGTTTCATCAGGGATATCAGAAATGCACGGCTTTCTGCTAGAGATAGTGCTGACGTTCGCCTTGGTGTACACAGTGTACGCAACAGCAATAGACCCAAAGAGAGGCAGTTTGGGGACGATAGCGCCACTGGCAATCGGGTTAATAGTGGGGGCTAATATTCTGGTGGGTGGGGCGTTCGATGGGGCGTGCATGAACCCGGCGAGGGCGTTTGGGCCGTCGTTGGTGGGGTGGAGATGGGACAATCATTGGATCTACTGGATCGGGCCATTGCTGGGAGGTGGGCTTGCTGCGCTTGTTTATGAGTACTTGGTGATTCCTGTTGAGCCTCCTCTGCATACTCACCAGCCCTTGGCTCCGGAGGATTACTAA | 840 | 53.45 | MPPRRYAFGRADEATHPDSIRATLAEFISTFIFVFAGEGSVLALDKIFSPADYGSYGHGGYSHGHGYGRRKTDTGRGASDLVVIAIAHAFALFSAVAASINISGGHVNPAVTFGALLGGRISLIRGIFYWVAQILGAIVASLLLRLATGGMRPMGFFVSSGISEMHGFLLEIVLTFALVYTVYATAIDPKRGSLGTIAPLAIGLIVGANILVGGAFDGACMNPARAFGPSLVGWRWDNHWIYWIGPLLGGGLAALVYEYLVIPVEPPLHTHQPLAPEDY | 279 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
13 | 8691917 | 8692918 | - | Carg07737-RA | Car13g00787 | 159704 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car13g00787 | 279 | Pfam | Major intrinsic protein | 14 | 257 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Car13g00787 | 279 | ProSitePatterns | MIP family signature. | 106 | 114 | IPR022357 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car03g01082 | Car-Chr3:8799843 | Car13g00787 | Car-Chr13:8691917 | 6.67E-105 | dispersed | |
Car07g00878 | Car-Chr7:4717731 | Car13g00787 | Car-Chr13:8691917 | 1.62E-103 | dispersed | |
Car13g00787 | Car-Chr13:8691917 | Car14g00213 | Car-Chr14:1009026 | 1.90E-91 | dispersed | |
Car13g00787 | Car-Chr13:8691917 | Car18g00101 | Car-Chr18:544821 | 1.36E-163 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car13g00787 | K09873 | - | csv:101208863 | 496.123 |