Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car13g00806 ATGCTGGCTGATCTCTCCTCCCCTTCCCTTCCTTGCTTTGAGCCTTTGCCTAATTGCTATGAAAGCAATGGAACCAATACCAAAAGAAAAAGAAGGCCTGCTGGGACTCCAGACCCAGATGCCGAAGTCGTATCTCTTTCTCCCAAAACCCTATTGGAATCAGATCGTTACGTTTGCGAGATCTGTAATCAAGGGTTTCAAAGAGATCAAAATCTACAAATGCATCGACGTCGACATAAGGTGCCGTGGAAGCTTTTGAAGAGAACCGAGCCGACGACCGCGGTTAGAAAACGAGTCTTTGTTTGCCCTGAACCGAGCTGTTTACACCATAACCCTACTCATGCTTTGGGGGATTTGGTGGGAATAAAGAAACACTTTAGAAGAAAACATAGTAACCATAAGCAATGGGTTTGTGAGAAATGTTCTAAAGGCTATGCTGTTCAATCCGATTATAAAGCTCATCTCAAAACATGTGGAACTCGAGGCCATTCCTGCGATTGCGGTCGGGTTTTCTCAAGGGTGGAGAGCTTCATAGAACATCAAGATAGCTGCAAATTGGGTCATCATCATCAACAATCAGAACAAAAGCTTCCATGTTTATCAAGAACAGCTTCAAGTCCAACTCCAAGCCCTTCTTCAGATACAAATTTCAGCTTCTTCAACAAAAACCATACAATAATTCCCCAAAGGATCATTACCCACCATCCACAAAACTTGGAACTTCAACTCTCCAACAATTCAACTTCCATTCACGTATCCGTTTCGCCGAAACGACGCGAAAATTACTCGACCCATTTGCAGCTTTCCATTGGTTCGTGCAATTACGATGAGAAAAACGACGACGGCAACGACGATCACGACGAGAAAACAAGAAATGGGTTGGATTTTTTGAAGGTAAAAGAGGAAGCTAAAGAGCAAATGAGAGTAGCAATGGAAGAGAAAGCTATAGCTGAAGAAGCAAGAAATGAAGCAAAGAAGCAAATTGAAATAGCTGAAAAGGAGTTAGCTAATGCGAAGAGAATGAGACAAGAAGCACAAGGTGAGCTACAAAGAGCTCTTGCTTTGAAAGAACATGCCATGAAGCAAATCAACTCCACCATTCTTCAAATCACTTGTCAAGTTTGTAGGCAACATTTTGAGCCATTCCCAACAATTTGA 1158 42.4 MLADLSSPSLPCFEPLPNCYESNGTNTKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRTEPTTAVRKRVFVCPEPSCLHHNPTHALGDLVGIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDSCKLGHHHQQSEQKLPCLSRTASSPTPSPSSDTNFSFFNKNHTIIPQRIITHHPQNLELQLSNNSTSIHVSVSPKRRENYSTHLQLSIGSCNYDEKNDDGNDDHDEKTRNGLDFLKVKEEAKEQMRVAMEEKAIAEEARNEAKKQIEIAEKELANAKRMRQEAQGELQRALALKEHAMKQINSTILQITCQVCRQHFEPFPTI 385
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 8865766 8867685 + Carg04866-RA Car13g00806 159723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car13g00806 385 ProSiteProfiles Zinc finger C2H2 type domain profile. 57 79 IPR013087 -
Car13g00806 385 MobiDBLite consensus disorder prediction 20 44 - -
Car13g00806 385 ProSitePatterns Zinc finger C2H2 type domain signature. 59 79 IPR013087 -
Car13g00806 385 Coils Coil 300 362 - -
Car13g00806 385 MobiDBLite consensus disorder prediction 195 217 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car13g00806 Car18g00079 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car13g00806 Car-Chr13:8865766 Car15g00826 Car-Chr15:4705386 1.16E-131 dispersed
Car13g00806 Car-Chr13:8865766 Car18g00079 Car-Chr18:417681 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4565 None None None None Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car13g00806 K25871 - csv:101210748 642.499