Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car13g00812 | ATGAGTCCGGAGCGGTTCGATCCGGACACTTACGGCGGAAATTACAACGGTTACGCCGGCGACATATGGAGTTTGGGGCTTACTCTTCTGGAGCTCTATTTAGGTCATTTTCCTTTCCTACCGCCTGGTCAGAGACCAGATTGGGCGACTCTGATGTGTGCGATTTGCTTCGGCGAGCCGCCGACGTTGCCGGAGGATGCGTCGGAGGACTTTCGGAGCTTCGTCGAGTGTTGCTTGCAGAAGGAATCGAGCAAGAGGTGGACGGTGGCGCAGTTGTTGACACATCCATTTGTGTGCAAGGAATCGAGATCTGATCGGTGA | 321 | 54.52 | MSPERFDPDTYGGNYNGYAGDIWSLGLTLLELYLGHFPFLPPGQRPDWATLMCAICFGEPPTLPEDASEDFRSFVECCLQKESSKRWTVAQLLTHPFVCKESRSDR | 106 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
13 | 8898235 | 8898555 | + | Carg04860-RA | Car13g00812 | 159729 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car13g00812 | 106 | Pfam | Protein kinase domain | 1 | 98 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Car13g00812 | 106 | ProSiteProfiles | Protein kinase domain profile. | 1 | 98 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car13g00812 | Car-Chr13:8898235 | Car14g01085 | Car-Chr14:9531660 | 3.12E-38 | dispersed | |
Car13g00812 | Car-Chr13:8898235 | Car18g00075 | Car-Chr18:394422 | 1.79E-60 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
89289 | PF00069 | Pkinase | 1.20E-12 | CL0016 | Car | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car13g00812 | K20604 | - | qsu:112004321 | 206.453 |