Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car13g00816 ATGCGAACTCAGATGGGAACTCGGTTGCTTGCTCTGTTTCTTTTGGGGTTCTGTGTTCTACTATCTACTGTGAGGCCAGATCTTGGCTCTGATAGAACAGCTCTGTTGGCCCTTCGCTCTGCTGTGGGTGGCCGAACTCTTCGGCTCTGGAATGTGACTGATCAGAATCACTGTTCTTGGCCTGGGATTCAATGCGAGGACAATCGTGTCACTGTTCTGCGTCTTCCCGGAGAGGCGCTTTTTGGTCAATTACCGACCGGCATTTTTGGGAACTTGACTCAGCTTCGCACTCTCAGCCTTCGGCTCAACGCCCTTTCCGGTCCGCTCCCATCAGATCTCTCTGCCTGCATTAATCTTCGCAACCTCTATTTGCAAGGTAATGAGTTTTCAGGTCTTGTCCCTGATTTCTTGTTCCAGCTTCATGATCTTGTTCGTCTTAATTTGGCGTCCAATAACTTTTCTGGGGAGATCTCTTCTGGGTTCAACAATTTGACCCGTCTTAGGACGCTGTTCCTCGAGAACAATCGCCTATCTGGGTCTATCCCGGATTTGAAGATCCCTATGGATCAGTTCAATGTTTCTAACAATCAATTAAATGGGTCGGTTCCAAAGGGATTACAGTCGTTTTCTTCGCGTTCCTTTTTGGGCAATTCTCTCTGCGGCCGCCCTCTAGAGGTTTGCGTTGGTGATCTTGTTGTGCCGACAGGGGAGGTTGGGGACAATGGTGGCTCTGGACACAAGAAAAAGCTGTCGGGGGGAGCCATTGCTGGGATTATCATTGGATCTGTACTGGGTTTTGTGTTGATACTTGTAATCTTAATGCTTTTGTGCCGAAAGAAAAGTGCCAAGCAAACGCGTTCAGTCGATTTAGCCACAGTGAAGGTTCCTGAAGTTGAAGTTCAGGCGGGTAAGCCAGTCGACGATATTGAAAATGGCGGTCATAGTGATGGTTTTACTGTACCAGCCACTGTCACTGCCACTGCCACTGCCACTGCTGCTGCAACAGCGGCGGCGGCAACAGTGAATGGCAATGGAACTGGGTCTAAAAAATTGGTGTTTTTTGGTAATGCTGCAAGGGTTTTTGATTTGGAGGATCTTTTGAGGGCTTCAGCCGAAGTGTTGGGGAAAGGAACCTTTGGGACTGCTTACAAAGCTGCATTAGAAGTGGGTTCTGTAGTGGCTGTGAAGAGGTTGAAGGATGTCGCCATAACTGAGAGGGAATTCAGAGAGAAGGTTGAAGCTGTTGGATCTATGGATCATGAAAACTTGGTCCCTCTCCGGGCTTACTATTTCAGTGCTGACGAGAAGCTTATTGTCTATGATTACATGCCCATGGGAAGCTTATCTGCTCTTCTACACGGAAACAAAGGAGCTGGAAGGACTCCATTGAGTTGGGAAATCAGGTCTGGAATTGCCCTTGGAGCTGCTCGTGGAATTGAATATCTGCATTCACAAGGTCCTAATGTCTCCCATGGAAACATAAAATCGTCGAATATTCTACTAACCAAATCCTACGATGCTCGAGTCTCCGATTTCGGTCTAGCGCATCTTGTTGGACCATCGTCCAGCCCCAACAGAGTAGCTGGTTACCGCGCACCAGAGGTCACTGATCCTCGTAAAGTATCCCATAAGGCTGATGTGTATAGTTTTGGCGTATTGCTATTGGAGCTTTTGACAGGAAAGGCTCCTACCTACTCCCTTTTGAATGAGGAAGGAGTTGATTTACCTAGATGGGTGCAGTCAGTTGTTAGGGAGGAATGGACTTCTGAAGTTTTCGACCTCGAACTTCTTAGGTACCAAAACATCGAGGAGGAAATGGTTCAACTATTGCAGCTTGCAGTCGATTGCGCAGCTCAGTATCCTGACAAGCGCCCCACAATGTCCGAAGTCACAAAGCGTATAGAAGAGCTTCGCCAATCCAGCCTACACGAAGTTGTCAATCCACAACCCGACGCCACTCGTGAATCAGACGACATGTCTTCTAGGTGA 1989 48.01 MRTQMGTRLLALFLLGFCVLLSTVRPDLGSDRTALLALRSAVGGRTLRLWNVTDQNHCSWPGIQCEDNRVTVLRLPGEALFGQLPTGIFGNLTQLRTLSLRLNALSGPLPSDLSACINLRNLYLQGNEFSGLVPDFLFQLHDLVRLNLASNNFSGEISSGFNNLTRLRTLFLENNRLSGSIPDLKIPMDQFNVSNNQLNGSVPKGLQSFSSRSFLGNSLCGRPLEVCVGDLVVPTGEVGDNGGSGHKKKLSGGAIAGIIIGSVLGFVLILVILMLLCRKKSAKQTRSVDLATVKVPEVEVQAGKPVDDIENGGHSDGFTVPATVTATATATAAATAAAATVNGNGTGSKKLVFFGNAARVFDLEDLLRASAEVLGKGTFGTAYKAALEVGSVVAVKRLKDVAITEREFREKVEAVGSMDHENLVPLRAYYFSADEKLIVYDYMPMGSLSALLHGNKGAGRTPLSWEIRSGIALGAARGIEYLHSQGPNVSHGNIKSSNILLTKSYDARVSDFGLAHLVGPSSSPNRVAGYRAPEVTDPRKVSHKADVYSFGVLLLELLTGKAPTYSLLNEEGVDLPRWVQSVVREEWTSEVFDLELLRYQNIEEEMVQLLQLAVDCAAQYPDKRPTMSEVTKRIEELRQSSLHEVVNPQPDATRESDDMSSR 662
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 8917335 8920068 + Carg04856-RA Car13g00816 159733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car13g00816 662 ProSiteProfiles Protein kinase domain profile. 368 646 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car13g00816 662 Pfam Leucine rich repeat 118 177 IPR001611 GO:0005515
Car13g00816 662 Pfam Leucine rich repeat N-terminal domain 29 65 IPR013210 -
Car13g00816 662 Pfam Protein kinase domain 371 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car13g00816 662 MobiDBLite consensus disorder prediction 640 662 - -
Car13g00816 662 ProSitePatterns Protein kinases ATP-binding region signature. 374 396 IPR017441 GO:0005524
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car13g00816 Car18g00071 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g00961 Car-Chr1:9191283 Car13g00816 Car-Chr13:8917335 3.03E-07 dispersed
Car13g00816 Car-Chr13:8917335 Car14g00761 Car-Chr14:4332047 0 dispersed
Car01g00679 Car-Chr1:4036438 Car13g00816 Car-Chr13:8917335 0 transposed
Car13g00816 Car-Chr13:8917335 Car18g00071 Car-Chr18:369067 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89290 PF00069 Pkinase 8.60E-39 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car13g00816 - - csv:101222458 1114.75