Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car13g00824 ATGTCGAAATTAACCAAGTATTTGTTACGTATTCCAAACAACCCTTGTGTTAAACGAGGGTCAATATTGTCTGGCAACCGGATCTCCCGGTCACCTCGCAGTACATACTCCATCCCTCTCCCTCACCTTCGATCATCCCAATCTTCTGCTTCTCATTTCTCCCCACCGGAAAAAGAAAACCCATCGGAGAAAGGCGAAATTGAATCCTTCTCTACCACTTTGTTCGAGAGAGAGATGGCAGGTTCACCAAAAAGTCTAGAGTGCGGCGGAGAGGGAGCCCAACCTTCGTCTTCGTTAATGGATAGCTTATTGGGTCTTCTTCGGGTTCGGGTCATTCGCGGCGTCAACCTCGCCGTACGCGACGTCCGCAGCAGCGATCCTTACATTGTCCTTAAAATGTCCAAACAGAAGTTGAAGACCCGCGTGATCAAAAAGGACATCAATCCCGAATGGAACGAGGACCTCACTCTATCTGTTATAGAACCGAACGCTACAGTCAAGCTGACGGTGTACGACCACGACACGTTCAGCATGGACGACAAGATGGGAGTCGCAGAGTTCGAGATCGGACCATTCATCGAAGCATTGCAAATGAACTTAGCAGAGGTACCAAGTGGAACGGTGGTGGCAAGAGTGCAGCCAAGCAGGCAAAATTGCCTAGCTGAAGAGAGCACCATTGTGTGGGAGGATGGCAAGGTTGTTCAAAACATTTGCCTACGCTTGCGCAACGTCGAGCGCGGCGAAGTCGAGATCCAGCTGCTATGGATCGATCTACCCGGTTCTAAAGCTGCATTGACCACGTGCTCCAAGACATGGATGGAACTGAGCGGTTACACGACGGTTGAACCTGGTAAAGAAAAGGAGCGTCTTGAGAAGATACCGGCAAAAACAAAGAAGGCTTGGGGTCCCGCGTGGCGTGTACCCGGCGTCGCTAACTATGTGAATCGCTTCAAGTCTACACTTCTTCTCCAACGCTGTTTATATAAGAAATGA 993 49.85 MSKLTKYLLRIPNNPCVKRGSILSGNRISRSPRSTYSIPLPHLRSSQSSASHFSPPEKENPSEKGEIESFSTTLFEREMAGSPKSLECGGEGAQPSSSLMDSLLGLLRVRVIRGVNLAVRDVRSSDPYIVLKMSKQKLKTRVIKKDINPEWNEDLTLSVIEPNATVKLTVYDHDTFSMDDKMGVAEFEIGPFIEALQMNLAEVPSGTVVARVQPSRQNCLAEESTIVWEDGKVVQNICLRLRNVERGEVEIQLLWIDLPGSKAALTTCSKTWMELSGYTTVEPGKEKERLEKIPAKTKKAWGPAWRVPGVANYVNRFKSTLLLQRCLYKK 330
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 8951867 8954666 - Carg04848-RA Car13g00824 159741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car13g00824 330 MobiDBLite consensus disorder prediction 33 67 - -
Car13g00824 330 MobiDBLite consensus disorder prediction 33 56 - -
Car13g00824 330 Pfam C2 domain 105 191 IPR000008 -
Car13g00824 330 ProSiteProfiles C2 domain profile. 88 205 IPR000008 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car13g00824 Car18g00066 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car13g00824 Car-Chr13:8951867 Car14g00769 Car-Chr14:4397737 5.42E-78 dispersed
Car10g00310 Car-Chr10:1521794 Car13g00824 Car-Chr13:8951867 5.66E-87 wgd
Car11g00289 Car-Chr11:1584944 Car13g00824 Car-Chr13:8951867 9.21E-85 wgd
Car13g00824 Car-Chr13:8951867 Car18g00066 Car-Chr18:340416 5.18E-95 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car13g00824 - - cmax:111495729 441.81