Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car13g00831 ATGAAGAACCTCCTCAAGAAGTTCCACATCATGTCCAGTGGTCAGTCAGACGACGCATCCGAAGGGTCTACTTCATCGAGGGGCAGTAAATTAATTGAGGCTTCATCGTCTGATAAGCTGCTATCTCGCTCCCGGCCGACCCATTTTAGCTCTGAGCATAAACCCTTATCGGGGTTATCCGGTTGGTTGAATTCTGTTACAAATAGGCGTAGCCCCAGCCCTCCATCATCTTCGAATCCCACTGCAGGGGAGATAATGGAGCCATCGGATTCAGTATCTAGCAGAGATGCTGCATTGGATACATCTAGGCATGATTCAGGGTCGAGTAACTCGAGGGATCCTGATATAGAGGAAGAGTATCAGATACAGCTTGCTTTGGAAATGAGTGCTAGAGAGGATCCTGAGGCGGCTCAGATTGAGGCTGTGAAGCAGATCAGTTTGGGGTCATGTGATCCTGATAACACTCCAGCTGAAGTTATTGCCTTCAGATATTGGAATTACAATTCTCTTAGCTATGATGACAAGATCTTGGATGGCTTTTATGACCTATATGGCGTCTTCACCGAGTCCACCTCAGAAAAAATGCCTTCCCTAGTTGATTTGCAAGGAGCACCAATGTCTGGCAGTGTCACTTGGGAAGCAGTTCTGATCAACAAAGCTGCTGATGCTAACTTATTGAAACTTGAACAGACAGCATTGGAGATGGCCATCAAGATGGGGTCAGAATCTCCAATTTCTGTAAATAGTTATTTGGTGCGGAAGCTTGCTGTTTTAGTTTCAGATCATATGGGGGGACCAGTGGGGGATCCTGAAAAGATGTTGATAAAATGGAGAAATCTTAGTTACAGCTTGAAAGCAACCCTTGGCAGTATGGTTTTGCCTCTTGGCTCCCTTACTGTAGGGTTGGCCCGTCATCGTGCATTGTTATTCAAGCTTTTGGCAGATGGCGTGGGCATTCCTTGTCGGTTGGTAAAAGGACCTCAGTACACGGGTTCTGATGATGTGGCAATGAACTTCGTAAAGATTGATGATGGAAGGGAGTACATTGTCGATTTAATGGCAGATCCTGGTGCACTTATTCCAGCTGATGTTGCTGGATCGCATGTAGAGTATGATGGATCCCCTTTTTCAGCCAGTCCACTTTCTAGAGATGTTGATTCCTCTCAGGCAGCATCTTCAAGCAGTGGGGTTGGCAGTTCATTAGAGGAAAATCCATATTTTGGGATATCGGATAGGAAACCAAAGTCCGGGACTCTCAGTGCCACAAAGGAATATGACCCTCCCAATGTCAACAAGGCGCCGTCACGTGATTTTGCTAGCAAACCAAATTATCCTGGCATGCACATCCGATCACCTTCATGGACTGAGGGTGTTAGTTCACCTGCAGTGCGCAGAATGAAAGTAAAGGATGTTTCACAATACATGATTGATGCTGCCAAAGAGAATCCACGGTTGGCTCAGAAGCTTCATGATGTGTTGCTTGAAAGTGGTGTAGTTGCTCCCCCTAACTTGTTTACCGAGGCATACCCCGACCAAATAGATGTTATCGTTGAGTCTAAGTCACCAACGGAAGACAAGGATCAAAGTAGGAAGGTGCCTGGTCTCGGTGAAAGTGTAGATAAGAAAGATCCTCGTCCAACTAACTTTTTGCCGCCCTTGCCTCAGCCCAGACAGCATTCTAAAGCAAGCCCTACCCATGCCCAACAACTGCACCATAAACCTCTGGAACTAAACCTCTCTCTTGATTCAAGAGAATCATCTGGACAACCTATAGCCTTACCGTTTGAGGTAACTCCAGTGAAGTATGGAAGAAATGTGCCTGTCGCTGCAGCAGCAGCAGCTGCTGCAGCTGTTGTTGCATCATCAATGGTGGTAGCTGCAGCAAAGAATACCGATGCAAATCTCGAAATTCCTGTAGCAGCTGCTGCCACAGCCACTGCTGCTGCAGTGGTTGCAACAACAGCAGCTGTCAACAAGCAATATGAGCAGGTTGAGGCCGATGCTGCTCTTTATGAGCAACGTGGAAGTGGAGATAGGGAGCATGAAGCTTGTGGAGAAAATTCAGAGGGTGAACGAATATCAGATAGATCGGTAGGAAACGAAAGCACAAAATCCGATATTACCCTTGATGATGTTGCTGAATGTGAAATCCCATGGGAAGAAATTTCCTTGGGCGAGCGTATTGGACTTGGATCATATGGGGAGGTCTACCGTGGAGATTGGCATGGAACTGAGGTAGCTGTGAAGAGATTTCTAGACCAGGATATTTCTGGCGAAACTCTTGAAGAATTCAAAAGTGAGGTTCGAATTATGAAAAGGCTTCGGCATCCAAATGTTGTTCTCTTCATGGGAGCTGTGACTCGTGCTCCCCATCTTTCAATTGTTACCGAATTTCTTCCCAGAGGTAGCTTGTACAGGTTACTTCACCGTCCCAACAATCAATTAGACGAACGAAAGCGAATGAGGATGGCCCTTGATGCAGCTCGGGGAATGAATTATTTGCACAATTGCACGCCTGTCGTTGTACACCGTGATTTGAAGTCCCCAAATCTACTTGTCGATAAAAATTGGGTCGTTAAGGTGTGTGATTTTGGTTTATCAAAAATGAAGCATAGCACATTTCTTTCTTCAAGGTCAACAGCAGGAACCGCTGAGTGGATGGCCCCAGAAGTGCTGAGAAATGAACCTTCAGATGAAAAGTGCGATGTCTATAGTTACGGAGTCATACTTTGGGAGCTGTCTACGATGCAACAACCGTGGGGAGGAATGAACCCAATGCAAGTTGTTGGCGCCGTTGGCTTTCAGCATCGCCGTCTTGACATCCCAGACAATATGGATCCTGCCATCGCCGACATTATTAGGAAATGCTGGCAAACAGATCCAAGGTTAAGACCTTCATTTGCGGAGATTATGGCTGCGTTAAAGCCGCTGCAGAAGCCAATGTCGAGTTCTCAAGTGCCGAGACCAAGTGGTCGTGATAAGGCTCGATTGTTGCAAGTTGCGGAAGACCCGTCAGGCTAG 3021 46.57 MKNLLKKFHIMSSGQSDDASEGSTSSRGSKLIEASSSDKLLSRSRPTHFSSEHKPLSGLSGWLNSVTNRRSPSPPSSSNPTAGEIMEPSDSVSSRDAALDTSRHDSGSSNSRDPDIEEEYQIQLALEMSAREDPEAAQIEAVKQISLGSCDPDNTPAEVIAFRYWNYNSLSYDDKILDGFYDLYGVFTESTSEKMPSLVDLQGAPMSGSVTWEAVLINKAADANLLKLEQTALEMAIKMGSESPISVNSYLVRKLAVLVSDHMGGPVGDPEKMLIKWRNLSYSLKATLGSMVLPLGSLTVGLARHRALLFKLLADGVGIPCRLVKGPQYTGSDDVAMNFVKIDDGREYIVDLMADPGALIPADVAGSHVEYDGSPFSASPLSRDVDSSQAASSSSGVGSSLEENPYFGISDRKPKSGTLSATKEYDPPNVNKAPSRDFASKPNYPGMHIRSPSWTEGVSSPAVRRMKVKDVSQYMIDAAKENPRLAQKLHDVLLESGVVAPPNLFTEAYPDQIDVIVESKSPTEDKDQSRKVPGLGESVDKKDPRPTNFLPPLPQPRQHSKASPTHAQQLHHKPLELNLSLDSRESSGQPIALPFEVTPVKYGRNVPVAAAAAAAAAVVASSMVVAAAKNTDANLEIPVAAAATATAAAVVATTAAVNKQYEQVEADAALYEQRGSGDREHEACGENSEGERISDRSVGNESTKSDITLDDVAECEIPWEEISLGERIGLGSYGEVYRGDWHGTEVAVKRFLDQDISGETLEEFKSEVRIMKRLRHPNVVLFMGAVTRAPHLSIVTEFLPRGSLYRLLHRPNNQLDERKRMRMALDAARGMNYLHNCTPVVVHRDLKSPNLLVDKNWVVKVCDFGLSKMKHSTFLSSRSTAGTAEWMAPEVLRNEPSDEKCDVYSYGVILWELSTMQQPWGGMNPMQVVGAVGFQHRRLDIPDNMDPAIADIIRKCWQTDPRLRPSFAEIMAALKPLQKPMSSSQVPRPSGRDKARLLQVAEDPSG 1006
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 8993799 9003762 - Carg04841-RA Car13g00831 159748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car13g00831 1006 ProSitePatterns Protein kinases ATP-binding region signature. 728 749 IPR017441 GO:0005524
Car13g00831 1006 MobiDBLite consensus disorder prediction 9 44 - -
Car13g00831 1006 MobiDBLite consensus disorder prediction 51 88 - -
Car13g00831 1006 ProSiteProfiles Protein kinase domain profile. 722 978 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car13g00831 1006 MobiDBLite consensus disorder prediction 97 116 - -
Car13g00831 1006 MobiDBLite consensus disorder prediction 978 1006 - -
Car13g00831 1006 MobiDBLite consensus disorder prediction 673 699 - -
Car13g00831 1006 Pfam Protein tyrosine and serine/threonine kinase 723 974 IPR001245 GO:0004672|GO:0006468
Car13g00831 1006 MobiDBLite consensus disorder prediction 1 116 - -
Car13g00831 1006 MobiDBLite consensus disorder prediction 378 446 - -
Car13g00831 1006 MobiDBLite consensus disorder prediction 519 544 - -
Car13g00831 1006 MobiDBLite consensus disorder prediction 380 401 - -
Car13g00831 1006 Pfam Ethylene-responsive protein kinase Le-CTR1 157 360 - -
Car13g00831 1006 MobiDBLite consensus disorder prediction 519 569 - -
Car13g00831 1006 MobiDBLite consensus disorder prediction 673 705 - -
Car13g00831 1006 ProSitePatterns Serine/Threonine protein kinases active-site signature. 841 853 IPR008271 GO:0004672|GO:0006468
Car13g00831 1006 Coils Coil 654 674 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car13g00831 Car18g00058 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car09g00284 Car-Chr9:1532056 Car13g00831 Car-Chr13:8993799 5.45E-80 dispersed
Car12g00824 Car-Chr12:7932155 Car13g00831 Car-Chr13:8993799 8.69E-61 dispersed
Car17g00344 Car-Chr17:2156736 Car13g00831 Car-Chr13:8993799 3.08E-108 dispersed
Car13g00831 Car-Chr13:8993799 Car18g00058 Car-Chr18:291307 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89291 PF07714 PK_Tyr_Ser-Thr 1.30E-67 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car13g00831 - - csv:101209024 1810.04