Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car13g00858 | ATGGCTGAGTTCACTGCAAACTTCCACAGCTTAAAGCCTTCACCTTTTCCTCTAATGGACATGGATCCCAACCAAATTCCAAGTCTGAATTTTCTTGACAACATTCCTGTTCTGTTCAACGACAGTTTCTTTGGCAATCAAGCTGCTGTTCCTCCCAGATTCCCGGAAATTTGGGGAGAAAATTTCTGTCAAGCAAATCAGATCACTGCACCTGTTTTTGAGCCTACAAATCCATCTGGAAGTGACCTCCATGGAAGCAAGAAAAGAAGGCTTCAAAATGAGGTATCTGAGAGCAGCTCTGGAAACTCAACCCCTCAGACTAAAAATAACTCTGGAAAAGGAAAGCGCTCGAAAAAAGGCGACGAAAACGACGGTGAGAAACCGAGGGAAGTGGTTCATGTTAGAGCCAAAAGAGGTCAAGCAACAGACAGTCACAGTATAGCAGAAAGGATAAGAAGAGGAAAAATCAATGAAAGATTGAGATGTTTGCAAGACATTGTCCCTGGATGCTACAAGACAATGGGAATGGCAGTGATGTTGGATGAGATAATCAATTATGTGCAGTCTTTGCAGAATCAAGTTGAGTTTCTTTCTATGAAACTCACAGCTGCAAGCTCCTATTATGACTTCAACTCAGACTCAGATACTGCAGATAGATTGAAGGGAAAGGAAATGAGAGAAGGAAATGGAGGATTATTGGTTGCACCAACTGAAGATGGTCCCTTTGACATGAGCTTTGGTTCTTATTCCACAGCAATATGA | 762 | 42.13 | MAEFTANFHSLKPSPFPLMDMDPNQIPSLNFLDNIPVLFNDSFFGNQAAVPPRFPEIWGENFCQANQITAPVFEPTNPSGSDLHGSKKRRLQNEVSESSSGNSTPQTKNNSGKGKRSKKGDENDGEKPREVVHVRAKRGQATDSHSIAERIRRGKINERLRCLQDIVPGCYKTMGMAVMLDEIINYVQSLQNQVEFLSMKLTAASSYYDFNSDSDTADRLKGKEMREGNGGLLVAPTEDGPFDMSFGSYSTAI | 253 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
13 | 9133842 | 9135828 | + | Carg04814-RA | Car13g00858 | 159775 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car13g00858 | 253 | MobiDBLite | consensus disorder prediction | 114 | 150 | - | - | |
Car13g00858 | 253 | Pfam | Helix-loop-helix DNA-binding domain | 144 | 191 | IPR011598 | GO:0046983 | |
Car13g00858 | 253 | MobiDBLite | consensus disorder prediction | 71 | 150 | - | - | |
Car13g00858 | 253 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 140 | 190 | IPR011598 | GO:0046983 | |
Car13g00858 | 253 | MobiDBLite | consensus disorder prediction | 95 | 111 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Car11g00253 | Car13g00858 | CCT | |
Car10g00215 | Car13g00858 | CCT | |
Car10g00215 | Car13g00858 | ECH | |
Car11g00253 | Car13g00858 | ECH | |
Car13g00858 | Car18g00037 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car13g00858 | Car-Chr13:9133842 | Car14g00749 | Car-Chr14:4193042 | 1.84E-45 | dispersed | |
Car10g00215 | Car-Chr10:1031717 | Car13g00858 | Car-Chr13:9133842 | 5.29E-69 | wgd | |
Car11g00253 | Car-Chr11:1404661 | Car13g00858 | Car-Chr13:9133842 | 1.39E-72 | wgd | |
Car13g00858 | Car-Chr13:9133842 | Car18g00037 | Car-Chr18:164214 | 3.93E-94 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
4569 | PF00010 | HLH | 2.50E-05 | No_clan | Car | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car13g00858 | - | - | csv:101213736 | 387.882 |