Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car13g00900 ATGTCTTTAGAGCATGAATTTCTGTTTGTTCCGGCATCTGGGTTTGCCTCAACAATGGCAAATAATGTGAATCTCTTTCTTTGTTTCCTTCTCTTTGTGGCTGTTTTTGGGCTTTGCCTTAGCCCCGGTGGTCTAGCTTGGGCTCTGGTTTCAAGGCCAAGAAACAAACCCATCATTCCTGGCCCTTGTGGCACTCCTTTTTTAGGTCAAGTTTTTACCTTTACTACTTCTCTCACTCATAGAGTTCTTGCCAACCTCGCTCATACCTTAAAGGCCAAATCTTTGATGTCATTCTCTGTTGGGTTCACTCGTTTTGTGATCTCTAGCAACCCCATCACTGCCAAAGAGCTTTTAAACAGCTCGGCGTTTGCTGATCGTCCCATTAAGGAGTCAGCTTACGAGCTTTTGTTCCATAGAGCAATGGGGTTCGCTCCATATGGGGAGTATTGGAGGAACCTTAGGAGAATCTCAGCCACTCATTTGTTTAGCCCCAAAAGGATATCTAACTTTGGGGAATTGAGGCAGAGAATTGGGGTTGAAATGGTGGAGGAAATTAAGGGTTTGATGGAAAAAAATGGGGAAATTGAAGTGAGGAAGGTTTTGCATTTCGGGTCGTTGAATAATGTTATGGGGAGTGTGTTTGGGAAAAGGTATGAGTTTTTTGGTGATGGTGGGAGTAATTGTGAGGTTGAGGGATTGGTGAGTGAAGGGTATGATCTGCTTGGGAGTTTCAATTGGAGTGATCACTTCCCTGTTTTGGGTTGGTTGGATTTGCAAGGCGTGAGGAAAAGGTGTAAAATTTTGGTGGGGAAAGTGAATGTTTTTGTTGGGAAAATCATTGAAGATCATAGAATGAATAGAAAAGGAAAGGGTGTTGTTGTTGTTGATAATGATAATGATAATGATGATGAAGATGATGACACCAAATCTGGAGATTTCGTTGATGTATTGCTTGATTTGGAAAAGGAAAACAAGCTCACCGACTCTGATATGATTGCTGTGTTATGGGAAATGATCTTCCGAGGAACAGACACGGTGGCGATTCTCCTAGAATGGATATTAGCCAGAATGGTTCTTCATCCCGACATCCAATCCAAACTCCAATCGGAAATCGACCGCGTTCTTATACCCGCCCGGAATGTCTCCGATTCCGACCTCCCAAATCTCCCTTATCTCCATGCAGTCGTTAAAGAGACTCTACGAATGCACCCTCCTGGCCCACTTCTCTCGTGGGCCCGCCTCGCCATCCACGACACCCACGTCGGCGGTCACTTCATTCCCGCCGGTACTACGGCGATGGTCAACATGTGGGCCATAACCCACGACCAACATATCTGGTCCGACCCGACAACATATGACCCGGAGAGGTTCCTTAAAGAGGAGGTGGCTATAATGGGGTCTGACTTACGGCTAGCACCGTTTGGATCTGGAAGACGGGTGTGCCCTGGGAAAGCCATGGGGTTAGCCACTGTGGAGCTTTGGCTAGCTCAGTTGGTTCAGAGGTTCAAATGGGTTCAGGTGAATGGTGGGTGTGGAAATGGCGTGGACTTGTCCGAGTGTTTGAAGCTGTCGCTGGAGATGAAACAGCCTTTGATCTGTAGGGCTGTTCCGAGGTTTTAG 1620 46.48 MSLEHEFLFVPASGFASTMANNVNLFLCFLLFVAVFGLCLSPGGLAWALVSRPRNKPIIPGPCGTPFLGQVFTFTTSLTHRVLANLAHTLKAKSLMSFSVGFTRFVISSNPITAKELLNSSAFADRPIKESAYELLFHRAMGFAPYGEYWRNLRRISATHLFSPKRISNFGELRQRIGVEMVEEIKGLMEKNGEIEVRKVLHFGSLNNVMGSVFGKRYEFFGDGGSNCEVEGLVSEGYDLLGSFNWSDHFPVLGWLDLQGVRKRCKILVGKVNVFVGKIIEDHRMNRKGKGVVVVDNDNDNDDEDDDTKSGDFVDVLLDLEKENKLTDSDMIAVLWEMIFRGTDTVAILLEWILARMVLHPDIQSKLQSEIDRVLIPARNVSDSDLPNLPYLHAVVKETLRMHPPGPLLSWARLAIHDTHVGGHFIPAGTTAMVNMWAITHDQHIWSDPTTYDPERFLKEEVAIMGSDLRLAPFGSGRRVCPGKAMGLATVELWLAQLVQRFKWVQVNGGCGNGVDLSECLKLSLEMKQPLICRAVPRF 539
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 9369615 9371460 - Carg04771-RA Car13g00900 159817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car13g00900 539 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 474 483 IPR017972 GO:0005506|GO:0016705
Car13g00900 539 Pfam Cytochrome P450 60 506 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car05g00399 Car-Chr5:2272347 Car13g00900 Car-Chr13:9369615 0 dispersed
Car08g00739 Car-Chr8:4766681 Car13g00900 Car-Chr13:9369615 1.70E-172 dispersed
Car13g00900 Car-Chr13:9369615 Car18g00648 Car-Chr18:7740965 0 dispersed
Car13g00900 Car-Chr13:9369615 Car12g00103 Car-Chr12:552560 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car13g00900 K20619 - csv:101203458 835.869