Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car13g00905 ATGGCCAAAGCTTCTTCCTCCTTCTTCCAAACCCTAAAGCGCTACATCAAGAAGCCTTGGGAGATCACCGGCCCGTGTGCAGATCCAGAGTACAAATTGGCCGTCCCGAGTGCCATAGAGTACAGGGTCTTTTGCCCCGCCACTACGAAGGAGAAAGCGATTGTCCCTACCTCCAATCCCGAGACCGTCTTTGATATTAAGTATTACACCCGCGACCAGCGTCGCAATCGCCCTCCAATTCGACGCACCATCCTCAAGAAGCCTGATGTCGAGAAGATGATGAAGGAGACGAAGTTCGACCCTGCTGACTTCCCCAAAGTTTATCTGACTGCCGCGATCGAGGAGGATATAAATGCCCGTGGAGGTGAAATGACAGGAAGAGTAAATAATATGATCTCAAAATTGAAGCAAGAGGGCGTTCATGTTGAAGCAAAACAAATGGAGGGCAAAAGGAAGAAGGGGCCTTCAAGGCAAGGGCCATTTCTTAGAGGCAATCCAAGAATTTTTAGAGTTTCTCCTTTGTTTGGAGGAAAAGACAGGCACAGCAAAGTTTGCACAATGAAGGGCTTAAGAGACAGAAGGATTAGGCTTTCAGCTCCCACTGCTATTCAACTTTATGATTTGCAGAACAGACTTGGCCTCAGCCGACCCAGCAAAGTCATAGACTGGCTGATTGATGTCACAAGATTTGATATTGATAAGCTTCCACCACTCCATTTTCCAAAAGATTTTGACCCAAATGCCTCGTTTCTTCATCATCTTGATATTTCAGATGCTGCAGCGAAGGCCAAACATGAAGAAACTGGGATGCTTTTGCTTCAGAAGTTGTCTCCTTCACCCAACCATGCTTCTTTTTCTGCTCTTCAGCTTCGAACCAACGCCATGACTGAAAATTGTTGCCATTTTGACCCTCCAAGCTTTCCATTCCCATTAATGGATCAGGCCAATCCAGCTTCATTTTCCTCGCCTTCTGAGCAGTTGCTGTTCCGTCCATTGACGATGCCACCCGAAGTTTCTTCTTACCTTCCTAACGGTGGAAATTAA 1044 46.65 MAKASSSFFQTLKRYIKKPWEITGPCADPEYKLAVPSAIEYRVFCPATTKEKAIVPTSNPETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKETKFDPADFPKVYLTAAIEEDINARGGEMTGRVNNMISKLKQEGVHVEAKQMEGKRKKGPSRQGPFLRGNPRIFRVSPLFGGKDRHSKVCTMKGLRDRRIRLSAPTAIQLYDLQNRLGLSRPSKVIDWLIDVTRFDIDKLPPLHFPKDFDPNASFLHHLDISDAAAKAKHEETGMLLLQKLSPSPNHASFSALQLRTNAMTENCCHFDPPSFPFPLMDQANPASFSSPSEQLLFRPLTMPPEVSSYLPNGGN 347
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 9396352 9402075 - Carg04766-RA Car13g00905 159822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car13g00905 347 MobiDBLite consensus disorder prediction 142 163 - -
Car13g00905 347 ProSiteProfiles TCP domain profile. 177 235 IPR017887 -
Car13g00905 347 Pfam TCP family transcription factor 177 249 IPR017887 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car10g00278 Car13g00905 CCT
Car11g00191 Car13g00905 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car13g00905 Car-Chr13:9396352 Car20g00876 Car-Chr20:8359926 3.03E-33 dispersed
Car18g00009 Car-Chr18:41130 Car13g00905 Car-Chr13:9396352 1.74E-78 transposed
Car10g00278 Car-Chr10:1325296 Car13g00905 Car-Chr13:9396352 8.57E-40 wgd
Car11g00191 Car-Chr11:1099966 Car13g00905 Car-Chr13:9396352 9.60E-39 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4576 PF03634 TCP 9.80E-23 No_clan Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car13g00905 - - cmax:111495302 452.21