Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car13g00932 ATGGCTTCCTTTGAAAAAGACGATACACCGATGCTATCAGACACTGGTCCACCATTGTTAGATGAACAACTGGGTTCTTATTTTCCTTCGTATGCATCATTGGCCCGGAGTTCATCGCTATCAATTCCAACTTCTTCTGGGATATATGTCAGTGATGCAAAGCTTGTTGGTTATACTGGTCCCTTACGAATTGAAAAAAAAAGTCCATTCCTAGAGAGTGGTTCAAAATATACTCGCCGTAAACCTGAAAAATCTTCACAGTCAAGTCCAGGTGTGACTGAAAGCAAAACTGCAGAGCCATTGACAGACAAATTTCCTTCTTTCAAGACGAATGGCGAGTCTGATTGGGCCATTCAACACTATGCTGGCAGAAATGAACACTTAATAAAGTCTGGCCAGCTGGGAGTGTGCAATGATCCTTTCTGTATAACATGCCCAACATATAATTCCAAAGCATCGCAACAGAAAAGCTCAAGAATGAGAGGCATATTTGACCCTGAGTTTCACAAGGATCTCTACGGAGAAGGGAAAGGTTGGGCAGTGAAGTTTCGGTCTGTCTGGTGCTTCTTGCTTCCGTATATTCCTGGAGTTATGAATCCTCATGCAAAAGTTGTTCAGCAATGGAACAAGTTTTTTGTTATTTCTTGCTTACTGGCGATCTTCTTGGACCCGTTATTTTTCTTCGTGCTTGCTGTCCACTTTGTTAAGAAGTGTATATTTATTAATTGGCCGATGACCACAACATTGGTGGTTTTCCGAAGCATGTCCGATTTTGTCTATTTCCTACACATGCTTCTCCAGTTTAGGTTGGCTTACGTGGCACCAGAAACCAGAGTTGTTGGAGCAGGCGAATTAGTTGACCATCCGAAGAAAATTGCTAAGAACTACCTTAAAGGAAATTTTTTTATAGATGTGCTTGTTGTTTTACCGCTGCCTCAGATAATAGTTTTTCTAATCCTGCCAAACTCTTTGGGGACATCTGGAGCAAATCATGCAAAAAATCTGTTACGCACTGCAGTTATGGCTCAATATGTTCCCAGACTGTACAGGTTTCTACCTCTTCTTGCTGGTCAGTCTCCAAGTGGCTTTGTTTTTGAGACAGCATGGGCAAATTTTGTCATCAATCTTCTCACCTTTATGTTGGCTGGTCATATTGTTGGGTCTCTCTGGTATCTCTTTGGGCTTCAGGGGGTGAATCGATGTTTTCGGGATGCCTGCAATCGCACTGGAAGTACGTTCTGCTTAGAATATATAGATTGTGGGCATGGGGACGAAGCTGGATATGACATTCAGGATTTACGGCGAGATCAGTGGAAAAGTAATGAGAATGCTACGGCATGTTTTGCTAAAGAAGGTTTTGATTATGGAATCTACCTTCAGGCTGTAAATCTTACTACAGAAAGCAATTTACTCACGAGATATACTTACTCATTGTTTTGGGGATTCCAGCAAATCAGTACTCTGGCCGGAAACCAAGTTCCAAGCTATTATGTCTATGAAGTCCTTTTCACTATGGGTATTATTGGGCTTGGTCTATTGCTGTTTGCTCTTCTCATCGGGAATATGCAGATTTTTCTTCAGGCTCTAGGAAGAAGGAGGTTAGAAATGTCATTAAGACGCCGTGATGTTGAGCAGTGGATGGAGCATCGTCGCTTGCCAGAGAGTTTAAGAAGGAAAGTACGACAGGCTGAAAGGTACAATTGGGCTTCTACAAGAGGCGTAAATGAAGAGAGGATTTTCGAAAATCTGCCTGAGGACCTACAAAGAAACATAAGACGACATCTCTTTAGATTTGTCAACAAGGTGCGCATTTTTGCACTGATGAACTATGAACCTATTTTAGATGCAATACGTGAGAGACTGCGACAAAGGACATACATAGAAGGAAGTGAAGTTTTTACTGCTGGAGATATCATTGAGAAGATGGTTTTCATTGTACGGGGGAAAATGGAGAGCCGTGTAGATGGGAACGGGATTGTGGTTCCCTTATCTGAAGGAGATGTCTGCGGCGAGGAACTTCTAACATGGTGTCTTGAGCATTCCTCCATAAACAGAGATATGAAGCGACATCAAATTCCAGCACAAAAATTGGTCAGCAACCGGACAGTAAAATGCTCGACGAATGTTGAAGCATTTTCTCTCCGGGCTGCAGACCTTGAAGAAGTGACCAGTATGTTTTCTAGATTCCTGCGAAACCCACGTGTTCAAGGAGCCATAAGGTGA 2223 42.42 MASFEKDDTPMLSDTGPPLLDEQLGSYFPSYASLARSSSLSIPTSSGIYVSDAKLVGYTGPLRIEKKSPFLESGSKYTRRKPEKSSQSSPGVTESKTAEPLTDKFPSFKTNGESDWAIQHYAGRNEHLIKSGQLGVCNDPFCITCPTYNSKASQQKSSRMRGIFDPEFHKDLYGEGKGWAVKFRSVWCFLLPYIPGVMNPHAKVVQQWNKFFVISCLLAIFLDPLFFFVLAVHFVKKCIFINWPMTTTLVVFRSMSDFVYFLHMLLQFRLAYVAPETRVVGAGELVDHPKKIAKNYLKGNFFIDVLVVLPLPQIIVFLILPNSLGTSGANHAKNLLRTAVMAQYVPRLYRFLPLLAGQSPSGFVFETAWANFVINLLTFMLAGHIVGSLWYLFGLQGVNRCFRDACNRTGSTFCLEYIDCGHGDEAGYDIQDLRRDQWKSNENATACFAKEGFDYGIYLQAVNLTTESNLLTRYTYSLFWGFQQISTLAGNQVPSYYVYEVLFTMGIIGLGLLLFALLIGNMQIFLQALGRRRLEMSLRRRDVEQWMEHRRLPESLRRKVRQAERYNWASTRGVNEERIFENLPEDLQRNIRRHLFRFVNKVRIFALMNYEPILDAIRERLRQRTYIEGSEVFTAGDIIEKMVFIVRGKMESRVDGNGIVVPLSEGDVCGEELLTWCLEHSSINRDMKRHQIPAQKLVSNRTVKCSTNVEAFSLRAADLEEVTSMFSRFLRNPRVQGAIR 740
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 9556231 9569271 - Carg04739-RA Car13g00932 159849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car13g00932 740 Pfam Ion transport protein 208 526 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Car13g00932 740 MobiDBLite consensus disorder prediction 73 110 - -
Car13g00932 740 ProSiteProfiles cAMP/cGMP binding motif profile. 617 674 IPR000595 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car13g00932 Car-Chr13:9556231 Car02g00892 Car-Chr2:6324982 1.30E-128 dispersed
Car13g00932 Car-Chr13:9556231 Car12g00767 Car-Chr12:7356547 1.06E-123 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car13g00932 K05391 - csv:101215903 1232.24