Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car13g00957 ATGGAAGGAAGTGACCAAATTCACTATCATCATCGTCCGCCTACTTCGTTTCCTCTCCAATTGTTAGAGAAGAAGGAATACGATCCCCAGCCGCCTCCCGAGCCCTCTAAGAAGCCCTCGCCCAAGAGGACCTCCACCAAAGACCGCCACACCAAAGTGGATGGCCGCGGCCGCCGTACCCGGATGCCTGCGCTTTGTGCTGCTAGAGTTTTCCAGCTCACCCGTGAGCTCGGCCACAAGTCCGACGGCGAAACCATCGAGTGGCTTCTTCAACAGGCCGAGCCTGCTGTTATTGCTGCCACTGGCACCGGCACAATTCCGGCCAACTTTAACTCCCTCAATACCTCCTTAAGAAGATCGGCCACCAGCATTTCCTTACCATCTCAACTAAGATCCTCATCTTACTATCACCCCGGAGTGATGGCGTTCAACTCTCAACCAATGAATATGGGTCCAATGACGCATGCAAAAGAAGATCACTTGCCTGACCCGCAGCGGAGCTATGTGCAGCAATCCACCACGGGGCTACTCCCGACGACTATTCCGGCCAACTTTTGGATGTTCTCCGATGGCAACAGCCAATTACTCAGCGGCGGAGGTGACTCTCTATGGAGGCTTCCACCGGCCAACCAAGACAACGCTTTATACAGAGGACAAGCCTCCGGTAGTGTTCGTTTCTCGAATCTGGCTGCTCCATTGACGCTTCTCCCCGGAAAGCCATTGGGTCCCAGTGGCAGCGGTGGAAGCATGAACGATGGACATATGAATATCTACGCCGGCCAAAGTAGGGCGCATGGGGCGGCTCCGGACAACAGTGTCTCATAA 825 54.67 MEGSDQIHYHHRPPTSFPLQLLEKKEYDPQPPPEPSKKPSPKRTSTKDRHTKVDGRGRRTRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFNSLNTSLRRSATSISLPSQLRSSSYYHPGVMAFNSQPMNMGPMTHAKEDHLPDPQRSYVQQSTTGLLPTTIPANFWMFSDGNSQLLSGGGDSLWRLPPANQDNALYRGQASGSVRFSNLAAPLTLLPGKPLGPSGSGGSMNDGHMNIYAGQSRAHGAAPDNSVS 274
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 9659431 9661136 - Carg04714-RA Car13g00957 159874
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car13g00957 274 ProSiteProfiles TCP domain profile. 46 100 IPR017887 -
Car13g00957 274 MobiDBLite consensus disorder prediction 1 60 - -
Car13g00957 274 MobiDBLite consensus disorder prediction 40 59 - -
Car13g00957 274 Pfam TCP family transcription factor 44 144 IPR017887 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car10g00176 Car13g00957 CCT
Car11g00147 Car13g00957 CCT
Car10g00176 Car13g00957 ECH
Car11g00147 Car13g00957 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car13g00957 Car-Chr13:9659431 Car11g01298 Car-Chr11:10753075 1.25E-39 dispersed
Car18g00741 Car-Chr18:8490719 Car13g00957 Car-Chr13:9659431 8.21E-42 dispersed
Car10g00176 Car-Chr10:839601 Car13g00957 Car-Chr13:9659431 7.41E-17 wgd
Car11g00147 Car-Chr11:831723 Car13g00957 Car-Chr13:9659431 7.04E-76 wgd
Car13g00957 Car-Chr13:9659431 Car18g01068 Car-Chr18:10862749 8.50E-54 wgd
Car13g00957 Car-Chr13:9659431 Car04g01690 Car-Chr4:9711586 9.82E-54 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4582 PF03634 TCP 1.30E-35 No_clan Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car13g00957 - - csv:101218047 320.087