Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car13g00957 | ATGGAAGGAAGTGACCAAATTCACTATCATCATCGTCCGCCTACTTCGTTTCCTCTCCAATTGTTAGAGAAGAAGGAATACGATCCCCAGCCGCCTCCCGAGCCCTCTAAGAAGCCCTCGCCCAAGAGGACCTCCACCAAAGACCGCCACACCAAAGTGGATGGCCGCGGCCGCCGTACCCGGATGCCTGCGCTTTGTGCTGCTAGAGTTTTCCAGCTCACCCGTGAGCTCGGCCACAAGTCCGACGGCGAAACCATCGAGTGGCTTCTTCAACAGGCCGAGCCTGCTGTTATTGCTGCCACTGGCACCGGCACAATTCCGGCCAACTTTAACTCCCTCAATACCTCCTTAAGAAGATCGGCCACCAGCATTTCCTTACCATCTCAACTAAGATCCTCATCTTACTATCACCCCGGAGTGATGGCGTTCAACTCTCAACCAATGAATATGGGTCCAATGACGCATGCAAAAGAAGATCACTTGCCTGACCCGCAGCGGAGCTATGTGCAGCAATCCACCACGGGGCTACTCCCGACGACTATTCCGGCCAACTTTTGGATGTTCTCCGATGGCAACAGCCAATTACTCAGCGGCGGAGGTGACTCTCTATGGAGGCTTCCACCGGCCAACCAAGACAACGCTTTATACAGAGGACAAGCCTCCGGTAGTGTTCGTTTCTCGAATCTGGCTGCTCCATTGACGCTTCTCCCCGGAAAGCCATTGGGTCCCAGTGGCAGCGGTGGAAGCATGAACGATGGACATATGAATATCTACGCCGGCCAAAGTAGGGCGCATGGGGCGGCTCCGGACAACAGTGTCTCATAA | 825 | 54.67 | MEGSDQIHYHHRPPTSFPLQLLEKKEYDPQPPPEPSKKPSPKRTSTKDRHTKVDGRGRRTRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFNSLNTSLRRSATSISLPSQLRSSSYYHPGVMAFNSQPMNMGPMTHAKEDHLPDPQRSYVQQSTTGLLPTTIPANFWMFSDGNSQLLSGGGDSLWRLPPANQDNALYRGQASGSVRFSNLAAPLTLLPGKPLGPSGSGGSMNDGHMNIYAGQSRAHGAAPDNSVS | 274 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
13 | 9659431 | 9661136 | - | Carg04714-RA | Car13g00957 | 159874 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car13g00957 | 274 | ProSiteProfiles | TCP domain profile. | 46 | 100 | IPR017887 | - | |
Car13g00957 | 274 | MobiDBLite | consensus disorder prediction | 1 | 60 | - | - | |
Car13g00957 | 274 | MobiDBLite | consensus disorder prediction | 40 | 59 | - | - | |
Car13g00957 | 274 | Pfam | TCP family transcription factor | 44 | 144 | IPR017887 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Car10g00176 | Car13g00957 | CCT | |
Car11g00147 | Car13g00957 | CCT | |
Car10g00176 | Car13g00957 | ECH | |
Car11g00147 | Car13g00957 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car13g00957 | Car-Chr13:9659431 | Car11g01298 | Car-Chr11:10753075 | 1.25E-39 | dispersed | |
Car18g00741 | Car-Chr18:8490719 | Car13g00957 | Car-Chr13:9659431 | 8.21E-42 | dispersed | |
Car10g00176 | Car-Chr10:839601 | Car13g00957 | Car-Chr13:9659431 | 7.41E-17 | wgd | |
Car11g00147 | Car-Chr11:831723 | Car13g00957 | Car-Chr13:9659431 | 7.04E-76 | wgd | |
Car13g00957 | Car-Chr13:9659431 | Car18g01068 | Car-Chr18:10862749 | 8.50E-54 | wgd | |
Car13g00957 | Car-Chr13:9659431 | Car04g01690 | Car-Chr4:9711586 | 9.82E-54 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
4582 | PF03634 | TCP | 1.30E-35 | No_clan | Car | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car13g00957 | - | - | csv:101218047 | 320.087 |