Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car13g00974 ATGAAGTTTAAATCCACTAACCGTTCATTCAATTCATACCCAGATGAAAATCATGCAAGTATTAGGAGATTGATGAGGCACACTGAGGATGATCACAAGAACCTATGGGACAAGGATCCGCTCAGCGATCTGAAGAACAACCAGGAAATGAAATGTGGGTTCAGTTCGATTCGAGTAATGGGTATGTTTGCGGTTTTAATGATGTTCATTTCTGTGGTCTTTTCTGTCTCTGTGGTTCTTAGAGACCCACCATCCGATGCTGTAATTGAAGGTTCAGATGTGTGGATTCCTCAGTGGAACTCCGACCCAGTAGATTCTAAGGATGGAGATCTTCATAGGGATATAGAGGCAGTTGATAAACTGCTTAGTGGCCTTCTTTCTGCCAAACATGAGGAAGGTTCTTGTCTTAGTAGGTACAATTCAGCTTCATATCAACGCAAGCTGGCGTACCAACCCTCTTCTTACCTGATCTCCAAATTGCGGAGTTATGAAGATCTTCATAAGCGTTGTGGAGTCTACACTGAGTCTTACAACAAAACTTTGGAGCAGCTTGGGTCTAATGGTAGTAGCAGCTCCTCGGACTGTAAATATGTTGTGTGGATTTCCTTCAGTGGATTAGGGAATAGAATACTAACCCTCGCTTCAGCATTTCTTTATGCTCTCCTCACAAATCGGGTTCTACTTGTTGACCCTGGAACTGACATGGCTGATCTCTTCTGTGAACCGTTTCCTGAGGTTTCCTGGTTTCTGCCCCAAGATTTCCCGTTGAAACATAAATTCAGCAAATTCAACCACAACTCTCCTAATTGCTATGGGAAAATAATGAAGAACAATAGGAGCACAGATCCAAGTGGAATGATTTTGCCATCTCTTGTTTATCTTCATTTGGTCCATGATTATGATGATGATGACAAGCTTTTTTTCTGTGATCAACACCAATCTCTTCTGCACCAATCCCCTTGGCTTGTTATGAAAACAGACAACTATTTTGTCCCCTCTCTCTTTTTGATCCCATCATTCGAGAAAGAACTTCATGATCTTTTCCCAAATAAAGATACAGTTTTCCACTTCTTGGGTCGATACCTGATTCATCCCGTGAATTCAGTTTGGGGACTGATTACGAGATATTATCAGGCTTACTTGGCTAGAGCTAGTGAAAGAATAGGCATTCAGATTAGAGTGTTTGATACAGGAACTGGACCTTTTCAACACATCTTGGATCAGGTTTTGGACTGTACCCTGAAGGAGAATCTGTTGCCACAAACGGAAAGGCGAACAAATGTGGTCGGTCTGGCTAGTAATCGAAAGTCAAAGGCCGTGCTGATAACTTCCTTGACCGCTGGTTACTTCGAGAAGTTGAGAGATATTTACTGGGAGAATCCGACGGTGACGGGAGAGAGAGTTAGTTTCTACCAACCAAGTCATGAGGAACACCAGCAAACTGAGAAGAGTATACATAACCAGAAGGCATTGGCAGAGATGTATTTGTTAAGTACAACTAATGTAGTGGTCACTAGTTCATGGTCGACCTTTGGATATGTGGCTCAAGGTCTTGGCGGTCTGAAACCATGGATATTGTACAAACCCGAGAATCGTACTGCACCGGATCCACCCTGCGGTCGAGCCATGTCCATGGAGCCCTGTTTCCATGCACCTCCTTTCTATGACTGCAAGGCTAAGAAAGGAGTGGACACTGGCAAACTTGTTCCTCATGTGAGGCATTGCGAGGACATGGCCTGGGGGCTTAAGTTGGTTGATCAACAGGATTGA 1770 43.56 MKFKSTNRSFNSYPDENHASIRRLMRHTEDDHKNLWDKDPLSDLKNNQEMKCGFSSIRVMGMFAVLMMFISVVFSVSVVLRDPPSDAVIEGSDVWIPQWNSDPVDSKDGDLHRDIEAVDKLLSGLLSAKHEEGSCLSRYNSASYQRKLAYQPSSYLISKLRSYEDLHKRCGVYTESYNKTLEQLGSNGSSSSSDCKYVVWISFSGLGNRILTLASAFLYALLTNRVLLVDPGTDMADLFCEPFPEVSWFLPQDFPLKHKFSKFNHNSPNCYGKIMKNNRSTDPSGMILPSLVYLHLVHDYDDDDKLFFCDQHQSLLHQSPWLVMKTDNYFVPSLFLIPSFEKELHDLFPNKDTVFHFLGRYLIHPVNSVWGLITRYYQAYLARASERIGIQIRVFDTGTGPFQHILDQVLDCTLKENLLPQTERRTNVVGLASNRKSKAVLITSLTAGYFEKLRDIYWENPTVTGERVSFYQPSHEEHQQTEKSIHNQKALAEMYLLSTTNVVVTSSWSTFGYVAQGLGGLKPWILYKPENRTAPDPPCGRAMSMEPCFHAPPFYDCKAKKGVDTGKLVPHVRHCEDMAWGLKLVDQQD 589
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 9728584 9731251 - Carg04697-RA Car13g00974 159891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car13g00974 589 Pfam Xyloglucan fucosyltransferase 116 558 IPR004938 GO:0008107|GO:0016020|GO:0042546
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car13g00974 Car-Chr13:9728584 Car16g00430 Car-Chr16:2685012 4.05E-171 dispersed
Car01g00737 Car-Chr1:4491587 Car13g00974 Car-Chr13:9728584 0 wgd
Car13g00974 Car-Chr13:9728584 Car04g01713 Car-Chr4:9819651 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car13g00974 K13681 - csv:101219153 990.719