Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car13g00984 ATGTTAAACCTTTTCTCTGTTTTCCTTTTCCTCACCTTCATCCTCCCTGCTGATGTAGTCCACGCCGGGCGTGGGCGGGAGTCTTGTACCTGTCATTCCGCCGCCGACCACAACGCAGAGGAGGCAATCAAATACAAGGTTGGCTCGATTGCTTCGGTGCTCGTGGCCGGCGCTGCGGGTGTGAGCCTTCCTTTGGTGGGCAAGAAGATTCCGTCTCTGAGGCCTGAAAATGACATCTTTTTCATGATCAAGGCTTTTGCTGCGGGTGTCATTTTAGGCACTGGGTTCATCCACATACTGCCTGATGCCTTCCAGGACTTGACCTCCCCCTGCATCGGACAGAACCCTTGGGGCGATTTCCCATTTGCGGGGTTCATTGCCATGGCCTCCTCCATCGGCACCTTGATGGTGGACACATTCGCAACCAGCTTCTACCAGAGACGCCACTTCAGTAAAATCAAGCATGTAATTGCAGTTGCAGACCAGGAAAGAGGCGAGGAGCATGCCGGTCACGTGCATGTCCACACCCACGCCACACATGGTCACGCTCACGGCTCTGCAGCACCCACCGGAGAAACATCGAGTCTGACTGAGTTAATCCGGTACCGGATTGTATCTCAGGTGTTGGAATTGGGGATTGTGGTTCATTCGGTAATAATTGGAATTTCTCTTGGTACCTCCCACAGCCCTGCCACCATTAAGCCACTGCTGGTGGCTCTGTCTTTCCACCAGTTTTTTGAGGGAATGGGACTCGGTGGCTGCATTTCCCAGGGGGTGCAGGCACAGTTTAGGTGGCGATCAGCGGCAGCAATGGCGACATTTTTTTCACTGACAGCGCCTGTGGGCATTGCAGTGGGAATCGGAATTTCGGGAGTTTACAGAGACAGCAGCCGGACGACTTTGATCGTGGAAGGGAGCATGAACTCTGCATCGGCCGGGATATTGATATACATGGCGCTGGTGGATCTTCTTGCGGCGGATTTCATGAACCCAAGGATGCAGAATAATTTGGGGCTTCAATTAGGATCTAATATCTCTTTGCTTCTGGGGGCTGCTTGCATGTCTGTTAAGAGGAGATTAGGGTTTATGGGTTTAGGTTTAGGTTTAGGTGTTATAGGGTTTAGAGGTTTAGGGTTTTAG 1140 51.93 MLNLFSVFLFLTFILPADVVHAGRGRESCTCHSAADHNAEEAIKYKVGSIASVLVAGAAGVSLPLVGKKIPSLRPENDIFFMIKAFAAGVILGTGFIHILPDAFQDLTSPCIGQNPWGDFPFAGFIAMASSIGTLMVDTFATSFYQRRHFSKIKHVIAVADQERGEEHAGHVHVHTHATHGHAHGSAAPTGETSSLTELIRYRIVSQVLELGIVVHSVIIGISLGTSHSPATIKPLLVALSFHQFFEGMGLGGCISQGVQAQFRWRSAAAMATFFSLTAPVGIAVGIGISGVYRDSSRTTLIVEGSMNSASAGILIYMALVDLLAADFMNPRMQNNLGLQLGSNISLLLGAACMSVKRRLGFMGLGLGLGVIGFRGLGF 379
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 9823321 9831481 - Carg04687-RA Car13g00984 159901
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car13g00984 379 Pfam ZIP Zinc transporter 45 356 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g01144 Car-Chr3:9181883 Car13g00984 Car-Chr13:9823321 3.19E-98 dispersed
Car05g00080 Car-Chr5:413327 Car13g00984 Car-Chr13:9823321 9.31E-25 dispersed
Car09g00912 Car-Chr9:5613211 Car13g00984 Car-Chr13:9823321 1.22E-08 dispersed
Car13g00334 Car-Chr13:6020668 Car13g00984 Car-Chr13:9823321 3.05E-10 dispersed
Car13g00984 Car-Chr13:9823321 Car12g00589 Car-Chr12:3928794 1.09E-92 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car13g00984 K14709 - csv:101216720 489.189