Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g00001 ATGTCACCTGTGCAAACGCTGCTACTTTTGGCTTTCTTCTGCGCTGGAATCCTCACAACCAGTTCTTTGACTGATCCCACAGATCTTGCGGCTCTGGAAGCCCTGAGAAGCGATTGGGAAAATACACCGCCAAGCTGGGGAGCATCAAATGATCCGTGTGGAACTCCCTGGGAAGGAGTGAGTTGCACCAATTCCAGAGTAACTGCACTGAGATTATCAACTATGGGCCTAAAAGGTAAACTTGGTGGTGACATTGGAATGCTGACTGGATTAAAATCATTGGACCTTTCGTTCAATGCAAATCTTACTGGTACAATCTCTCCAAGATTAGGGGATCTGCAGAATTTGAGTATCTTGATCCTGGCTGGGTGTGGGTTCAGTGGCAATATTCCTGAAGCACTGGGCAATCTTTCGGAGCTTTCCTTCTTGGCTTTAAATTCTAACAAATTCACTGGTATCATACCGCCGTCTCTGGGAAAACTCTCCAAACTCTATTGGCTGGACCTGGCAGAGAATCAATTGACAGGTAGCATCCCAGTCTCGACTTCCACATCTCCTGGTTTGGACCTCCTTCTGAATGCTAAACACTTTCATTTCAACAAAAACCAGTTATCAGGTTCCATTTCACCTCAACTTTTTAGCTCTGAAATGGTATTAATACACATATTATTTGATGGAAATCAATTTTCTGGGAGAATACCACAAACATTGGGACTTGTTCAGACCCTTGAGGTTCTGCGACTCGATCGGAATTCTCTAACAGGACCAGTCCCATCAAATCTGAACAACCTAACAAATATCAATGAATTGAATTTAGCCGGCAATAAGTTGACGGGTCCACTGCCAAACCTAACTCAAATGAGCTCACTAAATTACGTGGACCTTAGTAACAACTCATTTGATTCATCGCCAGCTCCAGAATGGTTCTCAAATCTACAATTTCTCACTACTCTGATCGTGGAGAATGGGTCAATACGAGGATCTGTGCCACAAGGAGTGTTTAGTTTACCACAAATACAACAAATAAAACTGAAGAACAATAAATTCAATGACACATTAGATATGGGTGACAAAGTGAGCGAACAGTTGCAGCTCGTTGATTTGCAAAATAACAATATTTCCCATCTTACCCTCGGTTCAAGATATACCAAAACTTTGATGCTGATAGGGAATCCTGTGTGTAGCACTGATGCTACCCTTCCAAACACCAACTACTGCCAGCTTCAAAACCAACCGGTGACATCCTATTCTACCAGCCTTGCCAGCTGTGGAAGTAAGTCATGTTCTTCTGATCAGAAGCTAAGCCCTCAGAGTTGTGAATGTGCCTATCCATTTGAAGGGACTTTATACTTTAGAGCACCCTCGTTCAGGGCATTGTCTAATGTGACTTTGTTTCATTCATTGGAAATGAGCCTTTGGAAAAAACTGGACCTGACGCCTGGTTCAGTTTTTATTCAAAACCCTTTTTTCAATGTTGACGATTATCTTCAGCTGCAGCTTGCACTTTTTCCGCCTGAGGAAAAGTATTTTAGTAGGTCAGATATTCAGAGGATTGGGTTTGACCTGAGTAATCAAACCTACAAGCCTCCCAAAGAATTTGGGCCATTTTATTTCATTGCATCTCCCTACGATTTTGAAGTCACGGCTAGGGAAACTTCAGTCAGCCCGGGAGTGATAATTGGGGTAGCTATTGGTTGTACCTTTCTCGTTCTAGGTCTGATTGGGGTTGGAATATATGCAATTTGGCAAAAGAAACGTGCAGAAAGGGCCATTGGATTGAGTCGGCCATTTGCTTCTTGGGCACCAAGTGGAAACGATAGTGGAGGTGCACCACAGCTGAAGGGAGCCAGATGGTTTTCTTATGATGAACTTAAAAAGTGCACAAATAATTTCTCCATGAGCAATGAGATAGGATCTGGAGGATATGGCAAGGTATACAGAGGAATGCTTGTGGATGGACAAGTAGTTGCGGTCAAAAGAGCTCAGCAAGGGTCAATGCAAGGTGGCCTTGAGTTCAAGACGGAAATCGAACTGCTTTCACGAGTTCATCACAAGAACCTTCTTGGCCTCGTGGGATTTTGTTTTGAACAAGGAGAACAGATGCTTGTTTATGAATTTATGCCTAATGGAACACTGAGAGATAGCCTATCTGGAAAATCTGGCATCAATCTTGATTGGAAGAGAAGACTTCGTATTGCACTTGGGTCTGCTAGAGGACTGACTTATTTACATGAACTTGCTAATCCTCCCATAATCCATAGAGACATTAAGTCCACCAATATTCTATTGGATGAGCATTTGAATGCAAAAGTTGCAGATTTTGGCTTGTCCAAGCTTGTCTCAGACAGTGAAAAGGGACACGTTTCCACTCAAGTTAAAGGAACGTTGGGTTACTTGGATCCTGAATATTACATGACTCAACAATTAACTGAGAAAAGTGATGTATATAGCTTTGGAGTGGTTATGTTGGAATTGTTAACTGCTAAGCTGCCCATCGAGAAAGGAAAGTACGTAGTTCGTGAGGTGCGTATGTTAATGAATAAAAATGAAGAAGAACATTATGGTCTGAAGCCGATAATGGATGCAACCATGATAAACAGTGCAACCACTATTATTGGGCTTGGAAGGTTCTTGGAGTTGGCCATGCAATGCGTTGAAGAATCAGCTACAGAGCGTCCCACAATGTGCGAAGTGGTGAAGGCAATTGAAAGTATTTTGCAGAACGATGGAATTAATACCAACACAACATCTGCATCTTCATCTGCAACCGACTTTGGGGCTTCCAGAACTGCTCCTAGGCATCCCTACAATGATCCTATACCAAAAAAGGACGCTAATGACAGCAGTGCTTTTGATTACAGCGGTGGATACACTCTTTCTACTAAAGTGGAACCCAAATAG 2901 42.61 MSPVQTLLLLAFFCAGILTTSSLTDPTDLAALEALRSDWENTPPSWGASNDPCGTPWEGVSCTNSRVTALRLSTMGLKGKLGGDIGMLTGLKSLDLSFNANLTGTISPRLGDLQNLSILILAGCGFSGNIPEALGNLSELSFLALNSNKFTGIIPPSLGKLSKLYWLDLAENQLTGSIPVSTSTSPGLDLLLNAKHFHFNKNQLSGSISPQLFSSEMVLIHILFDGNQFSGRIPQTLGLVQTLEVLRLDRNSLTGPVPSNLNNLTNINELNLAGNKLTGPLPNLTQMSSLNYVDLSNNSFDSSPAPEWFSNLQFLTTLIVENGSIRGSVPQGVFSLPQIQQIKLKNNKFNDTLDMGDKVSEQLQLVDLQNNNISHLTLGSRYTKTLMLIGNPVCSTDATLPNTNYCQLQNQPVTSYSTSLASCGSKSCSSDQKLSPQSCECAYPFEGTLYFRAPSFRALSNVTLFHSLEMSLWKKLDLTPGSVFIQNPFFNVDDYLQLQLALFPPEEKYFSRSDIQRIGFDLSNQTYKPPKEFGPFYFIASPYDFEVTARETSVSPGVIIGVAIGCTFLVLGLIGVGIYAIWQKKRAERAIGLSRPFASWAPSGNDSGGAPQLKGARWFSYDELKKCTNNFSMSNEIGSGGYGKVYRGMLVDGQVVAVKRAQQGSMQGGLEFKTEIELLSRVHHKNLLGLVGFCFEQGEQMLVYEFMPNGTLRDSLSGKSGINLDWKRRLRIALGSARGLTYLHELANPPIIHRDIKSTNILLDEHLNAKVADFGLSKLVSDSEKGHVSTQVKGTLGYLDPEYYMTQQLTEKSDVYSFGVVMLELLTAKLPIEKGKYVVREVRMLMNKNEEEHYGLKPIMDATMINSATTIIGLGRFLELAMQCVEESATERPTMCEVVKAIESILQNDGINTNTTSASSSATDFGASRTAPRHPYNDPIPKKDANDSSAFDYSGGYTLSTKVEPK 966
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 1758 7937 - Carg27963-RA Car14g00001 159903
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g00001 966 ProSiteProfiles Protein kinase domain profile. 631 906 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car14g00001 966 MobiDBLite consensus disorder prediction 911 966 - -
Car14g00001 966 ProSitePatterns Protein kinases ATP-binding region signature. 637 659 IPR017441 GO:0005524
Car14g00001 966 ProSitePatterns Serine/Threonine protein kinases active-site signature. 751 763 IPR008271 GO:0004672|GO:0006468
Car14g00001 966 Pfam Protein tyrosine and serine/threonine kinase 633 901 IPR001245 GO:0004672|GO:0006468
Car14g00001 966 MobiDBLite consensus disorder prediction 911 927 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g02149 Car-Chr4:17476592 Car14g00001 Car-Chr14:1758 3.47E-57 dispersed
Car07g01166 Car-Chr7:7039380 Car14g00001 Car-Chr14:1758 1.21E-73 dispersed
Car14g00001 Car-Chr14:1758 Car20g00883 Car-Chr20:8677069 1.35E-07 dispersed
Car14g01007 Car-Chr14:8275514 Car14g00001 Car-Chr14:1758 0 transposed
Car20g00884 Car-Chr20:8680461 Car14g00001 Car-Chr14:1758 3.19E-12 transposed
Car14g00001 Car-Chr14:1758 Car03g00240 Car-Chr3:3642283 3.10E-24 wgd
Car14g00001 Car-Chr14:1758 Car06g00151 Car-Chr6:931172 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89298 PF07714 PK_Tyr_Ser-Thr 5.20E-47 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g00001 - - csv:101220026 1697.95