Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g00008 ATGCTTTTCAAACAACTATTCCTCCTTCTTGCCTTAGCTCCTGCTTCCATTTATGCTTTGGAGGACATTGTTTTCAACGATGACGTTCTGGGATTGATAGTATTTAAAGCTGGCCTTCAAGATCCCATGGGGAAACTGGTCACATGGAACGAAGACGACCAAACTCCCTGCAACTGGATTGGTGTCAAATGCGATCCTAAAACCAATAGGGTCTCTGAGCTCGTCCTTGATGGATTCTCTTTGTGTGGTCATATCAATCGTGGACTCCTCAGGTTGCAATTCCTTCAAATACTCTCCCTTGCCAACAACAACTTCACTGGCACCGTCAACTCTGCTCTTTCTCACCTTGCAAATTTGCAAGTTATTGATTTGAGTGGCAACAGCTTATCTGGAACCATTCCCCAACAACTTTTCCTGCAATCTGGGTCTGTAAGACTTGTTTCATTCTCCAAAAATAAGCTTACAGGAAATATCCCTCAATCCTTAACCACTTGCTTCTCTCTGGAGCTTCTCAACTTCTCATCCAACCACCTCTCCGGGAAATTGCCTTCTGGGTTATGGTATTTGAGGGGGCTTCAGTCTTTGGATGTCTCTCACAACTTGCTTCAGGGGCACATTCCTCCAGGAATCCAAAATTTATACGATTTGAGATTTCTCAGCTTACACAAGAATCGATTTTCCGGAAAGCTTCCTGAGGATATTGGTGGCTGCCTACTCTTAAAATCAATTGATTTTAGTGAGAATATCCTTTCCGGGGCCCTTCCACACTCAATGCAGATGCTTACTTCTTGCACTTATCTGAATTTACGAGGAAATTCTCTCACGGGTGAACTCCCTCCTTGGATTGGAGAACTTAAAAATCTCGAGACCTTAGATCTTTCTTCCAATAACTTCTCTGGTCGGGTACCAAGTTCAATAGGCAACCTCCAATTATTGAAGAGCTTTAATGTATCCATGAACTATTTAACTGGAAGCTTGCCAGAATCCATGGCAAATTGTAATAGTCTCTTCAGTATTGATGCCAGCCATAATCACTTGTCTGGAAATCTCCCTTCGTGGATGTTTAGGGGAGCTATGCCAAGTGTTCCACTTTCTTCGCAGAGGCTGGGAGAAAACCTTTCATCTCCGGGCTCTCTTGGTAGTCTCCAAGTTTTGGATTTATCTTCAAATGTTTTCTGTGGTCACATTCCATCCAATGTGGGAGAATTTGGCAACTTGCAGTTGCTGAACATATCCAGAAACCATCTGGTGGGTTGTATTCCAGGGAGCATTGGTGAACTAAAATCAGCATATGCCCTTGACTTCAGTGTGAATCAATTAAATGGAAGTATTCCTGCTGAAATTGGAGGAGCGATCTTACTCAAGGAGTTGAGGTTGGAGCAGAACTTCCTGGCTGGGGAAATCCCAGTCCAGATTCACAAATGTTCGTTGTTAACATCGTTGATTCTTTCTCACAACAACCTGACAGGCCCAATTCCTGCTGCCCTCGCAAATCTCTCCAATCTTGAAAATGTGGACTTGTGTTTCAACAGACTTTCCGGAAGCCTGCCCAAGGATCTCATTAATCTCTCCCACCTCCTCTCCTTTAATATCTCCCACAATCATCTTGAGGGAGAACTTCCAGTTGGGGGCTTCTTCAACACTATATCTCCCTTCTCTATATCACATAACCCATCTCTTTGTGGTGCTGCTGTCAACACCTCCTGCCCCTCCCTCCACCCAAAACCTATTGTCCTAAACCCAAACTCTTCTGATACCAATGGAAATTCCCCCTCCCACAACCATCCCCATCAGATCATACTTACCATATCTTCCATTATTGCTATTGCTGCAGCTTCTTTTATCCTACTTGGTGTAGTGGCTGTCACCATCCTCAATATCCATGCAAGGTCCTCACACTCACGGTCTGCTGCTCTTGTGTTATCTGCTGGGGAGGACTTTAGCTGCTCCCCCAAAACTAATCCAGAATATGGAAACTTCGTCATGTTTTCTGGAGATGCAGAGTTTGTAGTTGGCGCCCAAACCTTACTGAACAAGGACGCTGAACTTGGTCGAGGTGGATTTGGGGTTGTTTACAAAACGGTGCTTCGAGATGGGTGTTTAGTTGCAATCAAGAAGCTAACTGTCACAAGCTTGATCAAGTCACGAGAAGATTTTGAGAGTGAAGTGAAGAAGCTGGGACAGATCAGGCATCACAATCTTGTGGCACTCGAAGGGTATTACTGGACAGCCTCCATGCAGCTCCTAATTTATGAATACCTCCCCAGTGGAAGTTTGTATAAACATATACATGATAGAACTGGCGACAATTGTTTGTCTTGGCGGCAGAGGTTCAAGATTGTTCTTGGGATGGCCAAAGGGTTGGCGTACTTGCACCATAATGGTATCATTCACTACAACTTGAAGTCAACCAATGTTTTGATAGGCAGCTCTGGGAAACCAAAAGTGGGGGACTATGGCTTGGCAAGGTTGTTGCCAATGTTGGACCGTTGCATCTTAAGCAGTAAAATCCAAAGTGCTTTGGGATACATGGCTCCAGAGTTCGCCTGCAAAACAGTGACTATAACTGATAAGTGTGATGTGTATGGCTTTGGCATCTTGGCTTTGGAAGTGGTGACTGGAAAAAGACCTGTGGAGTACATGGAAGATGATGTTATAGTGCTCTGTGATATGGTGAGAGCAGCTTTGGATGAAGGCATGGTGGAGCAATGTGTCGATGAGAGGCTCCGATCGAACTTCCGCATTGAAGAGGCTATTCCTGTAATGAAACTGGGTTTGATATGTGCGTCCCAAGTACCGTCGAACCGGCCAGACATGAATGAGGTCGTCAATATACTAGAGTTGATCCAATCCCCCTCTGAAGCCGACGAGGAGTTGGAATGA 2883 44.75 MLFKQLFLLLALAPASIYALEDIVFNDDVLGLIVFKAGLQDPMGKLVTWNEDDQTPCNWIGVKCDPKTNRVSELVLDGFSLCGHINRGLLRLQFLQILSLANNNFTGTVNSALSHLANLQVIDLSGNSLSGTIPQQLFLQSGSVRLVSFSKNKLTGNIPQSLTTCFSLELLNFSSNHLSGKLPSGLWYLRGLQSLDVSHNLLQGHIPPGIQNLYDLRFLSLHKNRFSGKLPEDIGGCLLLKSIDFSENILSGALPHSMQMLTSCTYLNLRGNSLTGELPPWIGELKNLETLDLSSNNFSGRVPSSIGNLQLLKSFNVSMNYLTGSLPESMANCNSLFSIDASHNHLSGNLPSWMFRGAMPSVPLSSQRLGENLSSPGSLGSLQVLDLSSNVFCGHIPSNVGEFGNLQLLNISRNHLVGCIPGSIGELKSAYALDFSVNQLNGSIPAEIGGAILLKELRLEQNFLAGEIPVQIHKCSLLTSLILSHNNLTGPIPAALANLSNLENVDLCFNRLSGSLPKDLINLSHLLSFNISHNHLEGELPVGGFFNTISPFSISHNPSLCGAAVNTSCPSLHPKPIVLNPNSSDTNGNSPSHNHPHQIILTISSIIAIAAASFILLGVVAVTILNIHARSSHSRSAALVLSAGEDFSCSPKTNPEYGNFVMFSGDAEFVVGAQTLLNKDAELGRGGFGVVYKTVLRDGCLVAIKKLTVTSLIKSREDFESEVKKLGQIRHHNLVALEGYYWTASMQLLIYEYLPSGSLYKHIHDRTGDNCLSWRQRFKIVLGMAKGLAYLHHNGIIHYNLKSTNVLIGSSGKPKVGDYGLARLLPMLDRCILSSKIQSALGYMAPEFACKTVTITDKCDVYGFGILALEVVTGKRPVEYMEDDVIVLCDMVRAALDEGMVEQCVDERLRSNFRIEEAIPVMKLGLICASQVPSNRPDMNEVVNILELIQSPSEADEELE 960
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 55752 58724 + Carg12436-RA Car14g00008 159910
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g00008 960 Pfam Protein tyrosine and serine/threonine kinase 678 945 IPR001245 GO:0004672|GO:0006468
Car14g00008 960 Pfam Leucine rich repeat 287 346 IPR001611 GO:0005515
Car14g00008 960 Pfam Leucine rich repeat N-terminal domain 26 65 IPR013210 -
Car14g00008 960 ProSitePatterns Protein kinases ATP-binding region signature. 683 706 IPR017441 GO:0005524
Car14g00008 960 ProSiteProfiles Protein kinase domain profile. 677 949 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car06g00162 Car14g00008 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car06g00657 Car-Chr6:3924543 Car14g00008 Car-Chr14:55752 1.31E-162 dispersed
Car14g00008 Car-Chr14:55752 Car14g01318 Car-Chr14:11167356 0 dispersed
Car14g00008 Car-Chr14:55752 Car15g00179 Car-Chr15:952707 0 wgd
Car14g00008 Car-Chr14:55752 Car04g00097 Car-Chr4:542736 0 wgd
Car14g00008 Car-Chr14:55752 Car04g00987 Car-Chr4:5691314 0 wgd
Car14g00008 Car-Chr14:55752 Car06g00162 Car-Chr6:982934 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89300 PF07714 PK_Tyr_Ser-Thr 9.40E-41 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g00008 - - csv:101222148 1617.05