Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g00012 ATGAATTGTAACGAGGAGAATAGAGGGGGAGATGATAGGGAAACTGAGGCGCCAGTTTTGAGGAACTCTGTTGAGGCAGAAGGGAAACCAGTCATCCAGATTGGATCCATAACAGACCAACACTTGACCATCGATGATAATCTTCTCGTTGATCCAAAATTACTATTTATTGGATCCAAGATTGGCGAGGGTGCTCATGGGAAGGTTTATGAAGGCAGGTACCGGAACCAAATTGTGGCCATTAAAGTTCTTCATCGAGGGAGTACTGTAGAAGAAAGGGCAGCACTTGAAAATCGTTTTGCCCGTGAAGTAAATATGATGTCCCGAGTAAAACATGAAAATCTTGTTAAGTTTATTGGAGCTTGTAAAGAACCTCTAATGGTGATAGTTACAGAGCTATTACCAGGAATGTCACTCAGGAAGTATCTGATGAATAATCGTAAGCAACAGCTGGACCCTCGGCTGGCCATTAACTTTGCTTTGGATATTGCTCGTGCTATGGATTGTCTACATGCAAATGGGATTATACATAGAGATCTCAAACCTGATAATTTGTTGCTTACTGCAAACCAAAGGTCTGTGAAGCTTGCAGACTTTGGACTTGCTAGAGAAGAATCTGTGACCGAGATGATGACTGCAGAAACAGGGACTTACCGCTGGATGGCTCCTGAGCTATATAGCACTGTGACATTGCGGCAGGGAGAGAAGAAGCATTACAACAACAAGGTGGACGTTTACAGCTTTGGAATTGTGTTATGGGAACTGTTGACCAACCGAATGCCATTTGAAGGGATGTCCAATTTGCAAGCTGCATATGCTGCTGCTTTCAAGCAAGAGAGACCGAGTATTCCAGGCGACATACCTCCAGATCTAGCATTTATCGTACAGTCGTGTTGGGTGGAAGATTCTAAGATGAGGCCCAGCTTCAGCCAGATCATCCGCATGCTTAATGCATATCTATTTACACTCCCACCTCCTTCTTCGCCGTCTTCACCGTCTTCACCAAAATCTGACACAACGGAGACACCAACGTCTAGCAATGGAAGATGGAACATGGTGCTGAAAGGTGCCCTTTCTTACATACTTCCCAAGCTTCTCCGTCTCTCCTCCATGAAAGAACTGGAACTGACCCACGCATTCATCGTCAAAGCTGGTCTCTGCAATCACATTCCTGTAATGACGAAGCTAATTGCGTTCTCATCCCTTTCTCCATCTGGAAGTCTCCCTCATGCTCATGCTTTGTTCCAAGACATTTCCATGGACGATTCTTTCATTTGTAACACCATGATTCGTGCCTACTCTAACAGCGTTTTCCCCCTTAAAGCTTTGCTTATTTACAACCATATGCAACGTATGGATGTTCATTCTGATCATTTCACCTACAATTTTGTGCTCAAGGCTTGTGCAAGAGCTATCAAATGCACTGAAAAGGACGACCAATGTTTTGGCCACGATATCATTTCACGCAAGGGCGCTGAAATTCATAGCCGCGTCCTGAAATTGGGGCTCGATCAAGATCATCACGTCCAGAATTCATTGCTTCTAATGTACTCCGGGTGTGGCTTGGTAGTTTTTGCTCGTATGCTTTTCGAAGAAATGACTGTGAGAAGTGCTGTTTCATGGAACATTATGATGTCGGCTTACAATCGAGTTCGTGACTATAAGTCAGCGGATTCTCTTCTTCAATTGATGCCTCAGACAAATTCGGGCATTAGAGCAACTGAAGTAACGTTTATATCTATTTTGGGCGCCTGTGCTGAAACCGGTTCATTGGAGATGGGGAAGAAAATCCACGAGTCCTTGAAAGCGGAGCATTACAGAATTGAAGGATATCTAGGTAATGCCATAGTTGATATGTACGCTAAATGTGGGGAGCTGAGCTTAGCTTTGGAGGTATTCAACGAAATGGAGATGAAGCCTGTAAGTTGCTGGAACGCGATGATTATGGGTTTGGCAGTTCATGGCTACTGTGAGAGAGCTTTGGACATGTTTGATTCCATGGAGGCAGGGAATGATGATCACAAACCCAATCGGGTGACTTTCGTGGCTATTCTGATTGCCTGTAGTCACAAGGGTCTGGTTGCAGAAGGACGTCATTTTTTAAGTCTGATGATTAACAAATACAAGATAATGCCGGACTTAAAGCACTACGGTTGCATGGTTGACCTTCTCAGCAGATGGGGTTTTTTGCAGGAAGCATACGAGATGATCAAAGGTTGCCCTTTCAGTTCATGCGCTGTTGTGTGGAGAACGTTGTTGGGTGGTTGTAGAGTACACAGACATTTAGAATTGGGCGAGGAAGCGTTCTGCAAACTGGGAGAGTTGGAGGCAAGGAAGGATGGAGATTATGTTCTATTGTCAAACATCTACGCCGAAGAAGAGCGGTGGGATGATGTGGGGCGACTGAGAAACGAGATGATTGAGTATGGAGTTTGCAAGAAAGCTGGATCCAGCCACGTTAAAATTCAATAG 2472 44.5 MNCNEENRGGDDRETEAPVLRNSVEAEGKPVIQIGSITDQHLTIDDNLLVDPKLLFIGSKIGEGAHGKVYEGRYRNQIVAIKVLHRGSTVEERAALENRFAREVNMMSRVKHENLVKFIGACKEPLMVIVTELLPGMSLRKYLMNNRKQQLDPRLAINFALDIARAMDCLHANGIIHRDLKPDNLLLTANQRSVKLADFGLAREESVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRMPFEGMSNLQAAYAAAFKQERPSIPGDIPPDLAFIVQSCWVEDSKMRPSFSQIIRMLNAYLFTLPPPSSPSSPSSPKSDTTETPTSSNGRWNMVLKGALSYILPKLLRLSSMKELELTHAFIVKAGLCNHIPVMTKLIAFSSLSPSGSLPHAHALFQDISMDDSFICNTMIRAYSNSVFPLKALLIYNHMQRMDVHSDHFTYNFVLKACARAIKCTEKDDQCFGHDIISRKGAEIHSRVLKLGLDQDHHVQNSLLLMYSGCGLVVFARMLFEEMTVRSAVSWNIMMSAYNRVRDYKSADSLLQLMPQTNSGIRATEVTFISILGACAETGSLEMGKKIHESLKAEHYRIEGYLGNAIVDMYAKCGELSLALEVFNEMEMKPVSCWNAMIMGLAVHGYCERALDMFDSMEAGNDDHKPNRVTFVAILIACSHKGLVAEGRHFLSLMINKYKIMPDLKHYGCMVDLLSRWGFLQEAYEMIKGCPFSSCAVVWRTLLGGCRVHRHLELGEEAFCKLGELEARKDGDYVLLSNIYAEEERWDDVGRLRNEMIEYGVCKKAGSSHVKIQ 823
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 73289 78946 - Carg12440-RA Car14g00012 159914
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g00012 823 Pfam Protein tyrosine and serine/threonine kinase 57 316 IPR001245 GO:0004672|GO:0006468
Car14g00012 823 ProSiteProfiles Protein kinase domain profile. 55 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car14g00012 823 Pfam E motif 759 820 IPR046848 -
Car14g00012 823 MobiDBLite consensus disorder prediction 326 348 - -
Car14g00012 823 Pfam PPR repeat family 422 470 IPR002885 -
Car14g00012 823 ProSitePatterns Serine/Threonine protein kinases active-site signature. 175 187 IPR008271 GO:0004672|GO:0006468
Car14g00012 823 MobiDBLite consensus disorder prediction 333 348 - -
Car14g00012 823 Pfam PPR repeat 539 565 IPR002885 -
Car14g00012 823 Pfam PPR repeat 643 668 IPR002885 -
Car14g00012 823 Pfam PPR repeat 614 639 IPR002885 -
Car14g00012 823 ProSitePatterns Protein kinases ATP-binding region signature. 61 82 IPR017441 GO:0005524
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car06g00170 Car14g00012 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car10g00081 Car-Chr10:365566 Car14g00012 Car-Chr14:73289 1.25E-145 dispersed
Car14g00012 Car-Chr14:73289 Car14g00615 Car-Chr14:3451017 2.20E-131 dispersed
Car14g00012 Car-Chr14:73289 Car06g00170 Car-Chr6:1018365 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89301 PF07714 PK_Tyr_Ser-Thr 4.10E-60 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g00012 - - cmax:111481423 662.144