Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car14g00022 | ATGAAGAGGCAGAGATTCACTGAACCCACAAGCCCTTTTGATCTGGTTTCCGATGAAATCATCTTCACCATACTCGACTTACTGAGCTCTAACCCAATTGATCTCAAGTCCTTCTCCTTAGCCTGCAAGTCATTCTACTCTGTTGAAGCAAAGCACCGCAAACTCCTCAAACCTCTTCGTTCTGAGCATCTTCCTACTGTTCTTAAACGATACACGCAATTGGCTCACCTTGATTTTTCCCTTTCTCCTCGGGTCACTGATGCCTCCTTGAACATCATTTCTAAGGCCTGCAATTCCAAGCTTCGTTCTATCGACCTTTCGAGGTCTAAATTCTTTTCGGCTACAGGGTTGTTGAGTCTGGCTACGAATTGTACAAATTTGGTGGAGATCGACTTATCGAACGCTACGGAGCTCAGAGATGCGGCGGCTGTGGCTTTAGCGAAGGCGAAAAATCTGGAGAAGCTGTGGTTGGGGAGGTGTAAATTGATAACGGATATGGGGATTGGGTGTATTGCAGTTGGATGCACGAAACTGAGATTCATCAGCTTAAAGTGGTGTATGAGTATTGGAGATTTGGGGGTCGGTTTGATCGCTGTTAAATGCGAACAAATTCGTAGTTTGGATCTCTCCTATATGCAGATCACGGAAAAATGTTTACCATCCATATTAAAGCTCAAGCATCTTGAAGATTTGGTATTAGAGGGATGCTTTGGCATAGACGATGACTGCCTTGCTGTTATTCGATATGGATGCAAGTCCTTAAGGAAACTTGACGTGTCGAGTTGTCCGAATATTAGTCCTTCCGGGCTGTCTTCCCTGACCCGTGCTACCTCATCTATACAGCAGCTTACTTTAGCTCATGGCTCTCCTGTGACTCTTGCTTTGGCTAAGAGTTTGAAAAGCTTGACCATGTTACAATCGGTCAAATTGGATGGGTGTGTTATTACATACGATGGACTCGAAGCCATAGGAAGTTGTTGTGTGTCGCTTAGTGAACTGAGCTTAAGCAAATGTGTTGGTGTGACTGATGAAGGACTCTCCTCCATTGTGAAAAAACACAAAGATTTGAAGAAGCTCGACATAACTTGTTGCCGCATGATAACTGATGTTTCTGTTTCCCATCTGACGAACTCATGTGGTGGCCTCACCTCTCTAAAAATGGAGTCTTGTTCCCTTGTTAGTAGACAAGGGTTCATCCTGATTGGACGACGATGCCATTTGCTTGAGGAGCTTGATTTAACTGATAATGAAATTGATAATGAAGGTCTGAGATCATTGTCTAGGTGTTCAAAACTCTCCATCTTAAAGCTAGGAATTTGTCTGAATCTTAATGACGAGGGACTTGCCCATATTGGCACGTCCTGCTCCAAGCTCATGGAGCTAGACTTGTACAGGTGTGTGGGAGTTACTGATTCTGGCCTTTTGGCGATCATCCATGGTTGCCCTGATCTTGAAACGATAAATATAGCATATTGTCGAGACATCACGGACGTGTCATTTTCATCGCTACATAAATGCTCAAGGCTGAAGACAATTGAAGCTCGAGGGTGCCCGCTTATCACATCTTCTGGCTTAGCAGCAGCTGTTGTAGGGTGCAAGTTACTAAGGAGATTAGACCTAAAGAAATGTTGTAATGTTGATGATGCCGGCATGATCTCCCTTGCTCATTTCTCTCAAAACCTCAGACAGATAAATTTGTCATATAGCTCGGTTACAGACGTGGGACTGTTGTCTCTTGCCAGCCTTAGCTGCCTTCAGCATCTGACTGTATTGCACACCAATAGATTAACTCCAAGTGGAGTTGCAGCTGCCTTGTTGGCAAATAGTTCCTTGACAAAAGTGAAACTCCATGCACTCTTTCAAGCTCTGCTACCCGAACGTCTTCTTAAACGCTTGGAAGTACGAGGATGCACATTCGAATGGCGAGAGAAAATATTTCAGGCTGAGTTGGATCCCAAATGCTGGAAATTGCAGTTGGAAGATCAGCATAAAGATGAGCCGCCTTCTGAGAAGAGCACTGACCAGTCCAGTCAAACCCACAAGAGAACCAATGGTTTGGGTATGGAAGCTCCGAAATTCAAGTCTCTTCAGCCGCCTCCATTCCCCATGTCTCCTTCTTCTTACCTATCCGCCTTCTCTTCTGGTTTAAGCCCCACTGAGCTTCTCAATTCCCCTCTCTTCTCCTTTGGTCTTTTTCCTTCTCCTACTACTGGTTCCTTCAACTTGAGAAACGATTACGATGATGCCGACCACCAAGAAATGAAGGCAGATCTCAAAAATTACTCCAATTCTTCGTTTAACCCTCAAACAAGATCCTCTGTTTCGTCTTATTTTCAGTCCTCTTCTTCCAACGTGACTCTACTGAATCCAGGCGGTTTGTCGTGTGATGAAAGTGGAGCGAAATCTGAAGTCGTTGCCACAGATATGGCGGCAGCTCAATCAAACCCAGTTTCTCAGCTGCCTGTTTACAACAGAGAACAGAAAAAATCGGAGAACGATGGATATAACTGGAGAAAATATGGGCAAAAACAAGTGAAAGGAAGCGAAAATCCACGAAGTTATTACAAGTGCACTTTTCCCAATTGCCCAACAAAGAAGAAAGTTGAAAGATCTTTAGATGGCCAAATCACTGAGATTGTTTACAAGGGAAGCCATAATCACGCCAAGCCCCAGCCCACAAGACGTTCCGGTAACTCCGCCGTTTACGACCCCTCGGCGGCGGAATCCACCTTGCTGCTGGAGGATTCCTCCGTCTCAGTGGGGGACGATGAAGTCGAACCCAATTCGCCGTTTAGCAACTCGGTGGACGACAATGAAAATGAACCGGAATCTAAAAGATGGAAAGGGGAAAATGAAAATGAGGGATTTTCTGGGGGTGGAAGCAGAACAGTGAAAGAGCCAAGAATTGTGGTTCAAACAACGAGCGAAATTGACATACTGCCTGATGGCTATAGATGGAGGAAATATGGACAAAAAGTGGTCAAAGGAAATCCAAATCCGAGGAGCTACTACAAGTGCACATCTTTAGGGTGCCCTGTAAGGAAACACATAGAGCGGGCGGCCAACGACACGAGGGCCGTGATCACTACCTACGAAGGCAAACACAACCACGAAGTCCCTGCAGCACGCGGCGGCGGTGGAAGCTTCTATAACGCGGTCAATCGACCTGTACCTGCCAACATTCCAATGCCAGTGAGGCCATCCGCTGCCGTCAGCCATTCTTTCCCGACAAATTTTCCGGCCACCTTCCTGGCTGGAAATATAAACATGTCAGAAATAGGAGCACGAGCAGCATCATCATCATTCCCATTTCAGACATCACAAGGAGTGCCCCCAAGTTTTCAAGTTTCAGGATTTGGAACAGCCGCCAAGGAAGAGGCCGAAGACAACATGTTCTTCAACTCATTTCTATCTTAG | 3417 | 45.6 | MKRQRFTEPTSPFDLVSDEIIFTILDLLSSNPIDLKSFSLACKSFYSVEAKHRKLLKPLRSEHLPTVLKRYTQLAHLDFSLSPRVTDASLNIISKACNSKLRSIDLSRSKFFSATGLLSLATNCTNLVEIDLSNATELRDAAAVALAKAKNLEKLWLGRCKLITDMGIGCIAVGCTKLRFISLKWCMSIGDLGVGLIAVKCEQIRSLDLSYMQITEKCLPSILKLKHLEDLVLEGCFGIDDDCLAVIRYGCKSLRKLDVSSCPNISPSGLSSLTRATSSIQQLTLAHGSPVTLALAKSLKSLTMLQSVKLDGCVITYDGLEAIGSCCVSLSELSLSKCVGVTDEGLSSIVKKHKDLKKLDITCCRMITDVSVSHLTNSCGGLTSLKMESCSLVSRQGFILIGRRCHLLEELDLTDNEIDNEGLRSLSRCSKLSILKLGICLNLNDEGLAHIGTSCSKLMELDLYRCVGVTDSGLLAIIHGCPDLETINIAYCRDITDVSFSSLHKCSRLKTIEARGCPLITSSGLAAAVVGCKLLRRLDLKKCCNVDDAGMISLAHFSQNLRQINLSYSSVTDVGLLSLASLSCLQHLTVLHTNRLTPSGVAAALLANSSLTKVKLHALFQALLPERLLKRLEVRGCTFEWREKIFQAELDPKCWKLQLEDQHKDEPPSEKSTDQSSQTHKRTNGLGMEAPKFKSLQPPPFPMSPSSYLSAFSSGLSPTELLNSPLFSFGLFPSPTTGSFNLRNDYDDADHQEMKADLKNYSNSSFNPQTRSSVSSYFQSSSSNVTLLNPGGLSCDESGAKSEVVATDMAAAQSNPVSQLPVYNREQKKSENDGYNWRKYGQKQVKGSENPRSYYKCTFPNCPTKKKVERSLDGQITEIVYKGSHNHAKPQPTRRSGNSAVYDPSAAESTLLLEDSSVSVGDDEVEPNSPFSNSVDDNENEPESKRWKGENENEGFSGGGSRTVKEPRIVVQTTSEIDILPDGYRWRKYGQKVVKGNPNPRSYYKCTSLGCPVRKHIERAANDTRAVITTYEGKHNHEVPAARGGGGSFYNAVNRPVPANIPMPVRPSAAVSHSFPTNFPATFLAGNINMSEIGARAASSSFPFQTSQGVPPSFQVSGFGTAAKEEAEDNMFFNSFLS | 1138 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 149155 | 155251 | - | Carg12450-RA | Car14g00022 | 159924 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car14g00022 | 1138 | MobiDBLite | consensus disorder prediction | 661 | 699 | - | - | |
Car14g00022 | 1138 | ProSiteProfiles | WRKY domain profile. | 975 | 1040 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Car14g00022 | 1138 | MobiDBLite | consensus disorder prediction | 938 | 952 | - | - | |
Car14g00022 | 1138 | Pfam | Leucine Rich repeat | 251 | 273 | IPR001611 | GO:0005515 | |
Car14g00022 | 1138 | Pfam | Leucine Rich repeat | 405 | 427 | IPR001611 | GO:0005515 | |
Car14g00022 | 1138 | Pfam | Leucine Rich repeat | 558 | 580 | IPR001611 | GO:0005515 | |
Car14g00022 | 1138 | Pfam | Leucine Rich repeat | 302 | 323 | IPR001611 | GO:0005515 | |
Car14g00022 | 1138 | Pfam | Leucine Rich repeat | 355 | 375 | IPR001611 | GO:0005515 | |
Car14g00022 | 1138 | Pfam | Leucine Rich repeat | 328 | 349 | IPR001611 | GO:0005515 | |
Car14g00022 | 1138 | Pfam | Leucine Rich repeat | 532 | 555 | IPR001611 | GO:0005515 | |
Car14g00022 | 1138 | MobiDBLite | consensus disorder prediction | 661 | 677 | - | - | |
Car14g00022 | 1138 | MobiDBLite | consensus disorder prediction | 917 | 962 | - | - | |
Car14g00022 | 1138 | Pfam | WRKY DNA -binding domain | 832 | 887 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Car14g00022 | 1138 | Pfam | WRKY DNA -binding domain | 982 | 1038 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Car14g00022 | 1138 | MobiDBLite | consensus disorder prediction | 880 | 903 | - | - | |
Car14g00022 | 1138 | ProSiteProfiles | WRKY domain profile. | 826 | 890 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Car14g00022 | 1138 | Coils | Coil | 135 | 155 | - | - | |
Car14g00022 | 1138 | MobiDBLite | consensus disorder prediction | 917 | 937 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car02g00856 | Car-Chr2:6165402 | Car14g00022 | Car-Chr14:149155 | 1.59E-15 | dispersed | |
Car08g00517 | Car-Chr8:3265172 | Car14g00022 | Car-Chr14:149155 | 1.64E-12 | dispersed | |
Car10g00431 | Car-Chr10:2149622 | Car14g00022 | Car-Chr14:149155 | 7.72E-16 | dispersed | |
Car10g00923 | Car-Chr10:6999038 | Car14g00022 | Car-Chr14:149155 | 3.87E-88 | dispersed | |
Car11g01354 | Car-Chr11:11091084 | Car14g00022 | Car-Chr14:149155 | 6.28E-08 | dispersed | |
Car14g00022 | Car-Chr14:149155 | Car15g00249 | Car-Chr15:1369138 | 4.52E-77 | dispersed | |
Car11g01005 | Car-Chr11:6956584 | Car14g00022 | Car-Chr14:149155 | 2.82E-25 | transposed | |
Car20g00282 | Car-Chr20:1620297 | Car14g00022 | Car-Chr14:149155 | 1.20E-09 | transposed | |
Car20g00283 | Car-Chr20:1623373 | Car14g00022 | Car-Chr14:149155 | 1.66E-09 | transposed | |
Car01g00644 | Car-Chr1:3796468 | Car14g00022 | Car-Chr14:149155 | 2.69E-113 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
4590 | PF03106 | WRKY | 2.40E-24 | CL0274 | Car | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car14g00022 | K10268 | - | csv:101205885 | 1183.7 |