Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g00022 ATGAAGAGGCAGAGATTCACTGAACCCACAAGCCCTTTTGATCTGGTTTCCGATGAAATCATCTTCACCATACTCGACTTACTGAGCTCTAACCCAATTGATCTCAAGTCCTTCTCCTTAGCCTGCAAGTCATTCTACTCTGTTGAAGCAAAGCACCGCAAACTCCTCAAACCTCTTCGTTCTGAGCATCTTCCTACTGTTCTTAAACGATACACGCAATTGGCTCACCTTGATTTTTCCCTTTCTCCTCGGGTCACTGATGCCTCCTTGAACATCATTTCTAAGGCCTGCAATTCCAAGCTTCGTTCTATCGACCTTTCGAGGTCTAAATTCTTTTCGGCTACAGGGTTGTTGAGTCTGGCTACGAATTGTACAAATTTGGTGGAGATCGACTTATCGAACGCTACGGAGCTCAGAGATGCGGCGGCTGTGGCTTTAGCGAAGGCGAAAAATCTGGAGAAGCTGTGGTTGGGGAGGTGTAAATTGATAACGGATATGGGGATTGGGTGTATTGCAGTTGGATGCACGAAACTGAGATTCATCAGCTTAAAGTGGTGTATGAGTATTGGAGATTTGGGGGTCGGTTTGATCGCTGTTAAATGCGAACAAATTCGTAGTTTGGATCTCTCCTATATGCAGATCACGGAAAAATGTTTACCATCCATATTAAAGCTCAAGCATCTTGAAGATTTGGTATTAGAGGGATGCTTTGGCATAGACGATGACTGCCTTGCTGTTATTCGATATGGATGCAAGTCCTTAAGGAAACTTGACGTGTCGAGTTGTCCGAATATTAGTCCTTCCGGGCTGTCTTCCCTGACCCGTGCTACCTCATCTATACAGCAGCTTACTTTAGCTCATGGCTCTCCTGTGACTCTTGCTTTGGCTAAGAGTTTGAAAAGCTTGACCATGTTACAATCGGTCAAATTGGATGGGTGTGTTATTACATACGATGGACTCGAAGCCATAGGAAGTTGTTGTGTGTCGCTTAGTGAACTGAGCTTAAGCAAATGTGTTGGTGTGACTGATGAAGGACTCTCCTCCATTGTGAAAAAACACAAAGATTTGAAGAAGCTCGACATAACTTGTTGCCGCATGATAACTGATGTTTCTGTTTCCCATCTGACGAACTCATGTGGTGGCCTCACCTCTCTAAAAATGGAGTCTTGTTCCCTTGTTAGTAGACAAGGGTTCATCCTGATTGGACGACGATGCCATTTGCTTGAGGAGCTTGATTTAACTGATAATGAAATTGATAATGAAGGTCTGAGATCATTGTCTAGGTGTTCAAAACTCTCCATCTTAAAGCTAGGAATTTGTCTGAATCTTAATGACGAGGGACTTGCCCATATTGGCACGTCCTGCTCCAAGCTCATGGAGCTAGACTTGTACAGGTGTGTGGGAGTTACTGATTCTGGCCTTTTGGCGATCATCCATGGTTGCCCTGATCTTGAAACGATAAATATAGCATATTGTCGAGACATCACGGACGTGTCATTTTCATCGCTACATAAATGCTCAAGGCTGAAGACAATTGAAGCTCGAGGGTGCCCGCTTATCACATCTTCTGGCTTAGCAGCAGCTGTTGTAGGGTGCAAGTTACTAAGGAGATTAGACCTAAAGAAATGTTGTAATGTTGATGATGCCGGCATGATCTCCCTTGCTCATTTCTCTCAAAACCTCAGACAGATAAATTTGTCATATAGCTCGGTTACAGACGTGGGACTGTTGTCTCTTGCCAGCCTTAGCTGCCTTCAGCATCTGACTGTATTGCACACCAATAGATTAACTCCAAGTGGAGTTGCAGCTGCCTTGTTGGCAAATAGTTCCTTGACAAAAGTGAAACTCCATGCACTCTTTCAAGCTCTGCTACCCGAACGTCTTCTTAAACGCTTGGAAGTACGAGGATGCACATTCGAATGGCGAGAGAAAATATTTCAGGCTGAGTTGGATCCCAAATGCTGGAAATTGCAGTTGGAAGATCAGCATAAAGATGAGCCGCCTTCTGAGAAGAGCACTGACCAGTCCAGTCAAACCCACAAGAGAACCAATGGTTTGGGTATGGAAGCTCCGAAATTCAAGTCTCTTCAGCCGCCTCCATTCCCCATGTCTCCTTCTTCTTACCTATCCGCCTTCTCTTCTGGTTTAAGCCCCACTGAGCTTCTCAATTCCCCTCTCTTCTCCTTTGGTCTTTTTCCTTCTCCTACTACTGGTTCCTTCAACTTGAGAAACGATTACGATGATGCCGACCACCAAGAAATGAAGGCAGATCTCAAAAATTACTCCAATTCTTCGTTTAACCCTCAAACAAGATCCTCTGTTTCGTCTTATTTTCAGTCCTCTTCTTCCAACGTGACTCTACTGAATCCAGGCGGTTTGTCGTGTGATGAAAGTGGAGCGAAATCTGAAGTCGTTGCCACAGATATGGCGGCAGCTCAATCAAACCCAGTTTCTCAGCTGCCTGTTTACAACAGAGAACAGAAAAAATCGGAGAACGATGGATATAACTGGAGAAAATATGGGCAAAAACAAGTGAAAGGAAGCGAAAATCCACGAAGTTATTACAAGTGCACTTTTCCCAATTGCCCAACAAAGAAGAAAGTTGAAAGATCTTTAGATGGCCAAATCACTGAGATTGTTTACAAGGGAAGCCATAATCACGCCAAGCCCCAGCCCACAAGACGTTCCGGTAACTCCGCCGTTTACGACCCCTCGGCGGCGGAATCCACCTTGCTGCTGGAGGATTCCTCCGTCTCAGTGGGGGACGATGAAGTCGAACCCAATTCGCCGTTTAGCAACTCGGTGGACGACAATGAAAATGAACCGGAATCTAAAAGATGGAAAGGGGAAAATGAAAATGAGGGATTTTCTGGGGGTGGAAGCAGAACAGTGAAAGAGCCAAGAATTGTGGTTCAAACAACGAGCGAAATTGACATACTGCCTGATGGCTATAGATGGAGGAAATATGGACAAAAAGTGGTCAAAGGAAATCCAAATCCGAGGAGCTACTACAAGTGCACATCTTTAGGGTGCCCTGTAAGGAAACACATAGAGCGGGCGGCCAACGACACGAGGGCCGTGATCACTACCTACGAAGGCAAACACAACCACGAAGTCCCTGCAGCACGCGGCGGCGGTGGAAGCTTCTATAACGCGGTCAATCGACCTGTACCTGCCAACATTCCAATGCCAGTGAGGCCATCCGCTGCCGTCAGCCATTCTTTCCCGACAAATTTTCCGGCCACCTTCCTGGCTGGAAATATAAACATGTCAGAAATAGGAGCACGAGCAGCATCATCATCATTCCCATTTCAGACATCACAAGGAGTGCCCCCAAGTTTTCAAGTTTCAGGATTTGGAACAGCCGCCAAGGAAGAGGCCGAAGACAACATGTTCTTCAACTCATTTCTATCTTAG 3417 45.6 MKRQRFTEPTSPFDLVSDEIIFTILDLLSSNPIDLKSFSLACKSFYSVEAKHRKLLKPLRSEHLPTVLKRYTQLAHLDFSLSPRVTDASLNIISKACNSKLRSIDLSRSKFFSATGLLSLATNCTNLVEIDLSNATELRDAAAVALAKAKNLEKLWLGRCKLITDMGIGCIAVGCTKLRFISLKWCMSIGDLGVGLIAVKCEQIRSLDLSYMQITEKCLPSILKLKHLEDLVLEGCFGIDDDCLAVIRYGCKSLRKLDVSSCPNISPSGLSSLTRATSSIQQLTLAHGSPVTLALAKSLKSLTMLQSVKLDGCVITYDGLEAIGSCCVSLSELSLSKCVGVTDEGLSSIVKKHKDLKKLDITCCRMITDVSVSHLTNSCGGLTSLKMESCSLVSRQGFILIGRRCHLLEELDLTDNEIDNEGLRSLSRCSKLSILKLGICLNLNDEGLAHIGTSCSKLMELDLYRCVGVTDSGLLAIIHGCPDLETINIAYCRDITDVSFSSLHKCSRLKTIEARGCPLITSSGLAAAVVGCKLLRRLDLKKCCNVDDAGMISLAHFSQNLRQINLSYSSVTDVGLLSLASLSCLQHLTVLHTNRLTPSGVAAALLANSSLTKVKLHALFQALLPERLLKRLEVRGCTFEWREKIFQAELDPKCWKLQLEDQHKDEPPSEKSTDQSSQTHKRTNGLGMEAPKFKSLQPPPFPMSPSSYLSAFSSGLSPTELLNSPLFSFGLFPSPTTGSFNLRNDYDDADHQEMKADLKNYSNSSFNPQTRSSVSSYFQSSSSNVTLLNPGGLSCDESGAKSEVVATDMAAAQSNPVSQLPVYNREQKKSENDGYNWRKYGQKQVKGSENPRSYYKCTFPNCPTKKKVERSLDGQITEIVYKGSHNHAKPQPTRRSGNSAVYDPSAAESTLLLEDSSVSVGDDEVEPNSPFSNSVDDNENEPESKRWKGENENEGFSGGGSRTVKEPRIVVQTTSEIDILPDGYRWRKYGQKVVKGNPNPRSYYKCTSLGCPVRKHIERAANDTRAVITTYEGKHNHEVPAARGGGGSFYNAVNRPVPANIPMPVRPSAAVSHSFPTNFPATFLAGNINMSEIGARAASSSFPFQTSQGVPPSFQVSGFGTAAKEEAEDNMFFNSFLS 1138
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 149155 155251 - Carg12450-RA Car14g00022 159924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g00022 1138 MobiDBLite consensus disorder prediction 661 699 - -
Car14g00022 1138 ProSiteProfiles WRKY domain profile. 975 1040 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car14g00022 1138 MobiDBLite consensus disorder prediction 938 952 - -
Car14g00022 1138 Pfam Leucine Rich repeat 251 273 IPR001611 GO:0005515
Car14g00022 1138 Pfam Leucine Rich repeat 405 427 IPR001611 GO:0005515
Car14g00022 1138 Pfam Leucine Rich repeat 558 580 IPR001611 GO:0005515
Car14g00022 1138 Pfam Leucine Rich repeat 302 323 IPR001611 GO:0005515
Car14g00022 1138 Pfam Leucine Rich repeat 355 375 IPR001611 GO:0005515
Car14g00022 1138 Pfam Leucine Rich repeat 328 349 IPR001611 GO:0005515
Car14g00022 1138 Pfam Leucine Rich repeat 532 555 IPR001611 GO:0005515
Car14g00022 1138 MobiDBLite consensus disorder prediction 661 677 - -
Car14g00022 1138 MobiDBLite consensus disorder prediction 917 962 - -
Car14g00022 1138 Pfam WRKY DNA -binding domain 832 887 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car14g00022 1138 Pfam WRKY DNA -binding domain 982 1038 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car14g00022 1138 MobiDBLite consensus disorder prediction 880 903 - -
Car14g00022 1138 ProSiteProfiles WRKY domain profile. 826 890 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car14g00022 1138 Coils Coil 135 155 - -
Car14g00022 1138 MobiDBLite consensus disorder prediction 917 937 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00856 Car-Chr2:6165402 Car14g00022 Car-Chr14:149155 1.59E-15 dispersed
Car08g00517 Car-Chr8:3265172 Car14g00022 Car-Chr14:149155 1.64E-12 dispersed
Car10g00431 Car-Chr10:2149622 Car14g00022 Car-Chr14:149155 7.72E-16 dispersed
Car10g00923 Car-Chr10:6999038 Car14g00022 Car-Chr14:149155 3.87E-88 dispersed
Car11g01354 Car-Chr11:11091084 Car14g00022 Car-Chr14:149155 6.28E-08 dispersed
Car14g00022 Car-Chr14:149155 Car15g00249 Car-Chr15:1369138 4.52E-77 dispersed
Car11g01005 Car-Chr11:6956584 Car14g00022 Car-Chr14:149155 2.82E-25 transposed
Car20g00282 Car-Chr20:1620297 Car14g00022 Car-Chr14:149155 1.20E-09 transposed
Car20g00283 Car-Chr20:1623373 Car14g00022 Car-Chr14:149155 1.66E-09 transposed
Car01g00644 Car-Chr1:3796468 Car14g00022 Car-Chr14:149155 2.69E-113 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4590 PF03106 WRKY 2.40E-24 CL0274 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g00022 K10268 - csv:101205885 1183.7