Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g00028 ATGGGAAAAACCCACAACCCTCTGAGTGAGTTTCAGGTAAACCCACTTCAGTTCATGCAGATTCCTGTAGCAAAAACAGCTGATTGGGGCTCTAAATCACCTAATAAGAGCAGAAAGTGGAAGGGCCAACAATGGAGAAGCTGTTCTTCATACCTGATTGCTCTCTTTTTTGCTCATCTTTTGGCCTTTTCCCTTCAACCGGTCACTGGCCAGATGTGGGACGGAGTGGCTGTTACACAAGGAGATTTTCAAGCTCTTCAAGCTATAAAACACGAACTCATCGACCTAAAAGGAGCTTTGCGTAGCTGGAATGGCAGTACTGGAGCTTGTTCCGGGCAGTGGACAGGAATCAAGTGTGTGAAGGGGCAGGTCATTGCTATACAGCTTCCATGGAAGGCTCTTGCCGGCCGGATTTCCGACAGGATTGGGCAGCTCCGGGAACTTAGAAAGCTCAGCCTCCACGACAATGTGATCTCTGGCACAGTCCCTCGGTCGCTCGGCTTCCTTCCAAATCTCAGAGGAATTTATCTTTTCAACAACAGATTCTCAGGTTCTATTCCTCCTACAATTGGTAATCTTCCCCTTCTTCAAACTCTTGATTTGAGCAACAATTTGCTCACAGGAGAAATTCCTTCTGGTCTAGCAAATTCTACCAAATTGATTAGAGTTAATCTGAGTTACAATTCATTGTCGGGATCTATCCCAAGTAGCTTTACGCAGTCGTTTTCTCTTACAATTCTCGCCCTTCAGCACAACAATATTTCTGGGACCGTCCCAGATTCTTGGGGTGGTCGAACTTGCCCACTTGCGGTTATAACGCTTGATCATAATGCAATATCTGGGGCAATTCCAGCTTCCTTGAGTAAACTGGAATGGCTTCAAGAGATTTCGATCAGTGAAAATAAGATCTCTGGGGCTATACCAGATGGAATAGGCAGGCTGAAGAGACTTCGCCATTTGGATCTGTCGAACAACGTCATTAATGGTGGCTTCCCTTCAAGTTTCTCCAATCTATCCTCTCTTGAATTATTGAATGTTGAAAATAATCGCCTGGAAAGCCAGATTCCAGGAGATATTGATAGATTGCAGAATCTCTCAGTGGTCAAGCTTGGGAAGAATCGATTTAGTGGTGAGATTCCTGCAAGTTTGGGGAACATTTCTGCTATTACCCAACTTGATTTCTCAGAAAATAACTTCACGGGACAGATTCCAACATCGCTGGCCAGTTTGTTGAATCTGACCTCTTTCAACGTCTCTTACAACAATCTCTCTGGCCCTGTCCCGGTTCTCTTATCAAATAAGTTCAATGCGAGCTCCTTTGTAGGGAACCTTCAACTGTGTGGTTTTAGTGCTTCAACTCCATGTCAACCTGCATCCTCCCCACAGAATAGTACAACTCCATCATCTGAGGTCCGGAAACCGCATCGCCGCCGCAAACTCAGTGTGAAGGACATAATTCTGATAGCCGCTGGAGCTCTGTTGGTGCTTCTTCTGCTTCTCTGCTCAATTTTGCTGTGTTGTTTGTTATCAAAAAGAGCTGCTGCTAGAAAGAATGACAAAACGGCTGGCAAGCAAGCGACAGCGAGAAGCATCGAGAAGGAAGCACCAGGCAGCACCGAAGTGGGGACGGGTGAAGCCGGAGGAAAACTAGTTCATTTTGATGGGCCATTTGTTTTCACTGCTGATGATCTTCTGTGTGCGACTGCGGAGATCATGGGCAAGAGCACATATGGAACAGCATATAAAGCAACATTAGAAGATGGTAATGAAGTTGCAGTGAAAAGATTGAGGGAAAAAACAACAAAAGGGCAGAAGGAATTTGAAACTGAAGTTGTGGCACTCGGGAAAATTAGACACCCAAATCTACTTGCTCTTAGAGCTTACTACATAGGCCCCAAAGGAGAGAAGCTTCTTGTCTTTGATTACATGCCTAGAGGAACTCGCGGGCCGGAAACCATGGTCGATTGGCCAATGAGGATGAAAATAGCGATCGGAATCACGCAAGGCTTGAACTACCTCCACACAGAGGAGAATCTAATTCATGGGTACCTCACGTCCAGCAACATTCTGCTGGATGATCAAACCAATGCTCGGATTGCAGATTTTGGGCTTCCTAAGCTCATGACTTCAGCTGCAGCCACAAATGTGATTGCCACTGCAGGAACACAGGGCTATAATGCACCAGAGCTAACAAAAACCAAGAAAACCACAACAAAGACAGATGTCTACAGCCTTGGAGTCATAATATTGGAACTTTTGACAGGAAAATCTCCTGGAGAAGCCATGGATGGAATGGATTTACCTCAGTGGGTGGCCTCAATAGTAAAGGAGGAGTGGACAAATGAAGTGTTTGATCTGGAGCTTATGAAAGACGCACCAAATATTGGTGATGAACTGCTGAACACCTTAAAACTAGCCCTGCATTGTGTCGATCCATCACCAGCTGCTCGGCCAGACATTCAGCAAATTCTCCAGCAACTGGAGGAAATTAAGACTTCTACTTCTGGTGAGGATAGCGCCAAAACTCAACCAGCAACTGAATAG 2544 45.52 MGKTHNPLSEFQVNPLQFMQIPVAKTADWGSKSPNKSRKWKGQQWRSCSSYLIALFFAHLLAFSLQPVTGQMWDGVAVTQGDFQALQAIKHELIDLKGALRSWNGSTGACSGQWTGIKCVKGQVIAIQLPWKALAGRISDRIGQLRELRKLSLHDNVISGTVPRSLGFLPNLRGIYLFNNRFSGSIPPTIGNLPLLQTLDLSNNLLTGEIPSGLANSTKLIRVNLSYNSLSGSIPSSFTQSFSLTILALQHNNISGTVPDSWGGRTCPLAVITLDHNAISGAIPASLSKLEWLQEISISENKISGAIPDGIGRLKRLRHLDLSNNVINGGFPSSFSNLSSLELLNVENNRLESQIPGDIDRLQNLSVVKLGKNRFSGEIPASLGNISAITQLDFSENNFTGQIPTSLASLLNLTSFNVSYNNLSGPVPVLLSNKFNASSFVGNLQLCGFSASTPCQPASSPQNSTTPSSEVRKPHRRRKLSVKDIILIAAGALLVLLLLLCSILLCCLLSKRAAARKNDKTAGKQATARSIEKEAPGSTEVGTGEAGGKLVHFDGPFVFTADDLLCATAEIMGKSTYGTAYKATLEDGNEVAVKRLREKTTKGQKEFETEVVALGKIRHPNLLALRAYYIGPKGEKLLVFDYMPRGTRGPETMVDWPMRMKIAIGITQGLNYLHTEENLIHGYLTSSNILLDDQTNARIADFGLPKLMTSAAATNVIATAGTQGYNAPELTKTKKTTTKTDVYSLGVIILELLTGKSPGEAMDGMDLPQWVASIVKEEWTNEVFDLELMKDAPNIGDELLNTLKLALHCVDPSPAARPDIQQILQQLEEIKTSTSGEDSAKTQPATE 847
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 179009 181678 + Carg12456-RA Car14g00028 159930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g00028 847 Pfam Leucine rich repeat 269 327 IPR001611 GO:0005515
Car14g00028 847 MobiDBLite consensus disorder prediction 455 469 - -
Car14g00028 847 MobiDBLite consensus disorder prediction 455 475 - -
Car14g00028 847 MobiDBLite consensus disorder prediction 826 847 - -
Car14g00028 847 MobiDBLite consensus disorder prediction 519 545 - -
Car14g00028 847 Pfam Protein kinase domain 569 826 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car14g00028 847 ProSiteProfiles Protein kinase domain profile. 566 830 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car14g00028 847 Pfam Leucine rich repeat N-terminal domain 81 119 IPR013210 -
Car14g00028 847 Pfam Leucine Rich Repeat 196 214 IPR001611 GO:0005515
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car03g00287 Car14g00028 CCT
Car06g00185 Car14g00028 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car14g00028 Car-Chr14:179009 Car03g00644 Car-Chr3:5823284 1.30E-56 dispersed
Car14g00028 Car-Chr14:179009 Car04g00118 Car-Chr4:623801 0 wgd
Car14g00028 Car-Chr14:179009 Car04g01016 Car-Chr4:5823672 0 wgd
Car14g00028 Car-Chr14:179009 Car06g00185 Car-Chr6:1115637 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89302 PF00069 Pkinase 1.20E-36 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g00028 - - bhj:120090401 1407.89