Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g00033 TGGGAAGATGGAAGTACTCCGCGGAGGCAGGAGGAGGAATATAGGGTCAAAACGGCACCCACTCGGCTCCAAACCAACTACTTCCAATTTCTCACCCCATTCCTTCAACATCCTTCAAATCTCGCTATCAACACTTCAATTCCTAGAAACCCACTTGTCATACCCTCCAAATTTCCTTCCTCCATCAAATTTCAAACTTCATTCTCCAACCTCTCACTTTCTTCCAACCCTCAAACAATCACCAAATTCCCGATGAACAACACGGCCCAGCCGGGAAACATGGCCGCCGGATCCCCGCCATGGCTGAACACCGGCGACAACTCTTGGCAAATTACAGCCTCCACTCTCGTCGGACTTCAGAGCATGCCTGGCCTTGTGATTCTCTACGCCAGCATCGTCAAAAAGAAATGGGCTGTCAATTCTGCCTTTATGGTCCTCTACGCCTTCGCCGCCGTTCTAATTTGTTGGGTCCTCGTCGGTTACCGAATGGCCTTTGGCGACCAGCTGGTTCCTCTGTGGGGCAAAGGGATTCCAGCTCTGACCCAAAGTTACCTAATTGACCGAGCCAATATCCCCGAGAGTGGCAATACAAACAACGATGGAAGGGTAACGCTCAGAATTGAACCCAATATTCCGATGGCTTCGCTTGTGTATTTCCAGTTCACTTTTGCTGCGATTACGGTGATTTTACTGGCTGGCTCTGTTCTTGCAAGAATGAACATCAAAGCTTGGATGGCGTTTGTTCCTCTTTGGGTAATTTTCGCATACACCGTCGGAGCATATTCTGTTTGGGGCGGAGGATTTCTCTTTCAATGGGGCGTAATTGATTACTCCGGCGGCTACGTGATCCATCTCTCTTCAGGGATTGCTGGCCTGACCGCCGCTTATTGGGTTGGGCCGAGGATTAAGAGTGACAGGGAGAGGTTTCCGCCCAATAACGTACTGCTGATGCTGGCCGGAGCAGGGCTGCTGTGGATGGGATGGTCTGGATTTAACGGCGGGGCGCCGCACTCGGCGAACGTGGTCGCGTCGATAGCTGTGCTGAATACGAACGTGAGCGCCGCGACGAGCCTGCTGGTGTGGACCATTTTGGACGTATTGTACTTTGGGAAGCCATCGGTGATTGGAGCCATTCAGGGTATGATGACTGGCTTGGCTTGCGTTACTCCCGGCGCAGGAATAGTGCAGACGTGGGCGGCTATGATAATGGGGATTCTTGGAGGGAGTATTCCATGGGTATCCATGATGGTCCTTCACAAAAAATTGAGTTTCTTGCAAAAGGCTGACGACACGCTCGGCGTATTTCACACGCACGCGGTGGCGGGAATGATGGGCGGGCTTTTAACAGGGCTTTTAGCCGAGCCCACTCTATGCGATCTATACCTACCGATAACCGGCACACGCGGAGCCTTTTACGGCAAAAACGGCGGCGTTCAATTCCTGAAACAACTGGCCGGATCCGCGTTTATTATAGGATGGAACGTAGTGTCTACGACCATAATACTCCTCTTTATTCGGCTGTTTATGCCATTGAGGATGCCTGACGAGGAACTTATGATCGGCGATGACGCCGTCCACGGCGAGGAGGCTTATGCTCTTTGGGGCGACGGCGAGAAATTCGATCCCAGAAGGCACGGTACTGCGGGGAACAATGTGGAAGAAGGAAGGGCCTCGCCCTATATCCATGGTGCTAGAGGAGTAATCATCGAGTTG 1713 52.01 WEDGSTPRRQEEEYRVKTAPTRLQTNYFQFLTPFLQHPSNLAINTSIPRNPLVIPSKFPSSIKFQTSFSNLSLSSNPQTITKFPMNNTAQPGNMAAGSPPWLNTGDNSWQITASTLVGLQSMPGLVILYASIVKKKWAVNSAFMVLYAFAAVLICWVLVGYRMAFGDQLVPLWGKGIPALTQSYLIDRANIPESGNTNNDGRVTLRIEPNIPMASLVYFQFTFAAITVILLAGSVLARMNIKAWMAFVPLWVIFAYTVGAYSVWGGGFLFQWGVIDYSGGYVIHLSSGIAGLTAAYWVGPRIKSDRERFPPNNVLLMLAGAGLLWMGWSGFNGGAPHSANVVASIAVLNTNVSAATSLLVWTILDVLYFGKPSVIGAIQGMMTGLACVTPGAGIVQTWAAMIMGILGGSIPWVSMMVLHKKLSFLQKADDTLGVFHTHAVAGMMGGLLTGLLAEPTLCDLYLPITGTRGAFYGKNGGVQFLKQLAGSAFIIGWNVVSTTIILLFIRLFMPLRMPDEELMIGDDAVHGEEAYALWGDGEKFDPRRHGTAGNNVEEGRASPYIHGARGVIIEL 571
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 203181 205280 + Carg12461-RA Car14g00033 159935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g00033 571 Pfam Ammonium Transporter Family 109 531 IPR024041 GO:0008519|GO:0016020|GO:0072488
Car14g00033 571 ProSitePatterns Ammonium transporters signature. 276 301 IPR018047 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car05g00341 Car-Chr5:1964897 Car14g00033 Car-Chr14:203181 0 dispersed
Car08g00916 Car-Chr8:6158119 Car14g00033 Car-Chr14:203181 7.87E-20 dispersed
Car14g00033 Car-Chr14:203181 Car14g01662 Car-Chr14:13259126 2.50E-15 dispersed
Car14g00033 Car-Chr14:203181 Car06g00188 Car-Chr6:1131490 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g00033 K03320 - csv:101207321 885.945