Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g00043 ATGGAAGGACATCATCCCCATCACCTTATTCCGCTCCACCACCAGCAACAGTTTCAACTCCGTCCGCCGTCGCATCTCCACCCGAGCCTCACCGTCTCCGCCGATCCAACCCTAGCCGCCGCCGCCGCCGCCGCCACCGACAGATTCCCTCAATGGAGCCTTCAGGAAACAAAGGAGTTTTTAACGATCAGAGCCGAGCTGGATCAGACTTTCATGGAAACCAAACGAAACAAGCTCTTGTGGGGAATTACATCCTCCAAAATGAAGGAAAAGGGTTTCAATCGCAGCGCTGAACAGTGTAAATGTAAATGGAAAAACCTCGTTACTCATTATAAGGGTTGTGAAACAATGGAGCCAGAAAATTTAAGGCAACAATTTCCATTCTACACAGAACTAAAAGCAATTTTCGGAGCAAGAATGCAAAGGATGTTCATGGCGGAGGCGGAGAGCGGTGGGAGTGGATCGAAGAAGAAGATGAAGACATTATCGTCCGACGACGAGGAAGAAAACGAAGACAGTAACGGCGACGGGGGCGAGACGAAGGTTAGCAGTAGGAAGAGGAAGAAGGTTAAAGGCACGACGATGGCGACGGACGGCGGAGGGGGAAGCGGTAGCCGTTTGAAAGAAATATTGGAAGATTTCATGAACCAACAAATGCAAATGGAGGTGCAATGGAGGGAGGCATTTGAGGCAAGGGAAAAGGAGAGGGAAATGAGAGAAATGGAGTGGAGAAGGAACATGGAAGCTTTGGAACATGAGAGGATTATGTTGGAAAGAAGTTGGAGGGAAAGAGAAGAACAAAGGAGAATGAGAGAGGAAATTAGGGGTGAGAAAAGAGATGCCTTAATCACAGCTTTGTTAAACAAGATTAGAAGAGATGATCATATGTAG 891 47.81 MEGHHPHHLIPLHHQQQFQLRPPSHLHPSLTVSADPTLAAAAAAATDRFPQWSLQETKEFLTIRAELDQTFMETKRNKLLWGITSSKMKEKGFNRSAEQCKCKWKNLVTHYKGCETMEPENLRQQFPFYTELKAIFGARMQRMFMAEAESGGSGSKKKMKTLSSDDEEENEDSNGDGGETKVSSRKRKKVKGTTMATDGGGGSGSRLKEILEDFMNQQMQMEVQWREAFEAREKEREMREMEWRRNMEALEHERIMLERSWREREEQRRMREEIRGEKRDALITALLNKIRRDDHM 296
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 258742 259792 - Carg12471-RA Car14g00043 159945
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g00043 296 PANTHER TRANSCRIPTION FACTOR MYB FAMILY-RELATED 1 293 - -
Car14g00043 296 ProSiteProfiles Myb-like domain profile. 52 108 IPR001005 -
Car14g00043 296 CDD GT1 50 115 - -
Car14g00043 296 PANTHER - 1 293 - -
Car14g00043 296 Gene3D - 52 113 - -
Car14g00043 296 MobiDBLite consensus disorder prediction 147 205 - -
Car14g00043 296 Pfam Myb/SANT-like DNA-binding domain 51 135 IPR044822 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car03g00305 Car14g00043 CCT
Car06g00199 Car14g00043 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g00549 Car-Chr4:3096901 Car14g00043 Car-Chr14:258742 1.11E-39 dispersed
Car14g00043 Car-Chr14:258742 Car04g01484 Car-Chr4:8644007 3.26E-14 dispersed
Car14g00043 Car-Chr14:258742 Car03g00305 Car-Chr3:4103947 6.28E-51 wgd
Car14g00043 Car-Chr14:258742 Car06g00199 Car-Chr6:1182338 5.13E-117 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4591 PF13837 Myb_DNA-bind_4 7.50E-17 CL0123 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g00043 - - csv:101211490 370.933