Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g00054 ATGATATCAGATATAAGACATCAAAATCTAGTTGAACTGATTGGTTGTTGCGTCGAAGGCACGCATCGAATTTTGGTGTATGAATACCTGGAAAACAACAGCCTTGCGAATACTTTGCTTGGTTCATTGAGTAAGCATGTCGTTCTGGATTGGCCAATGAGAGCTAAGATTTGTCTCGGTACAGCTTTGGGTCTTGCATTTCTGCATGAGGAAGCTGAACCGTCTGTTGTTCATAGAGATATCAAGGCTAGCAATATACTTCTTGACAGAAACTTTGATCCTAAAATAGGAGACTTTGGGTTGGCTAAACTTTTCCCGGACAACGTTACTCATGTTAGTACTCGAGTGGCCGGAACTGTTGGATATTTGGCTCCCGAGTATGCACTCTTAGGACAGTTGACAAAGAAGGCAGATGTATACAGTTTTGGTGTGCTCATGCTGGAAGTAATCAGTGGAAGTAGCAGCACCAAGGCAGCATTTGGAGAAGAATTGTTGATTCTCGTGGAATGGACTTGGAAATTAAAACAAGAAGGACGGCTCGTAGAACTCATTGATCCGGAACTGATCAATTATCCAAAGGCCGAGGTGGTGCGTTTCATTACGGTTGCACTCTTCTGTACCCAAGCAGCAGCAAATCAAAGGCCAACCATGAAGCAGGTCGTGGAAATGCTTTCAAGAGAGGTACACCTTAACGAAAAACTACTGACAGAGCCTGGAGTATACAAAGGACACAAAACTAGGAAGTTAAATGGTGGTGGTGCTGCTGCTTCTATTTCTGGGGGAACATCCTCCTCCCATGGAATCAAATATAAAAAAGCTATGAAGACTTCTCCATCTTCATCTCAATTTAACAGCTCAAACAGTCTGACTCAAATGCTTCCTAGGTGA 888 43.02 MISDIRHQNLVELIGCCVEGTHRILVYEYLENNSLANTLLGSLSKHVVLDWPMRAKICLGTALGLAFLHEEAEPSVVHRDIKASNILLDRNFDPKIGDFGLAKLFPDNVTHVSTRVAGTVGYLAPEYALLGQLTKKADVYSFGVLMLEVISGSSSTKAAFGEELLILVEWTWKLKQEGRLVELIDPELINYPKAEVVRFITVALFCTQAAANQRPTMKQVVEMLSREVHLNEKLLTEPGVYKGHKTRKLNGGGAAASISGGTSSSHGIKYKKAMKTSPSSSQFNSSNSLTQMLPR 295
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 307780 311330 + Carg12482-RA Car14g00054 159956
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g00054 295 ProSitePatterns Serine/Threonine protein kinases active-site signature. 76 88 IPR008271 GO:0004672|GO:0006468
Car14g00054 295 MobiDBLite consensus disorder prediction 256 295 - -
Car14g00054 295 ProSiteProfiles Protein kinase domain profile. 1 230 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car14g00054 295 Pfam Protein tyrosine and serine/threonine kinase 2 224 IPR001245 GO:0004672|GO:0006468
Car14g00054 295 MobiDBLite consensus disorder prediction 252 295 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car14g00054 Car-Chr14:307780 Car13g00461 Car-Chr13:6946609 2.35E-78 dispersed
Car18g00337 Car-Chr18:2076658 Car14g00054 Car-Chr14:307780 3.37E-25 dispersed
Car14g00054 Car-Chr14:307780 Car16g00424 Car-Chr16:2649297 5.07E-91 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89305 PF07714 PK_Tyr_Ser-Thr 4.70E-35 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g00054 - - csv:101218048 502.671