Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g00080 ATGGCGCCTCCGGAAGTTTCCCAATCCGACATTGATTTGGAACAGGGGAATCATCGGCGGTCTGTTAGTGGTAGTGATTTGAGCGCCGATTGTAGCGTCTATTTCTCTGACGCCGATGAGGGTTCGTGTCCCTCTCAGTTTTTGTCGACCAACGGTGGTTCTTATGATGAGTTTAGGTTTTCTTTTGTTTCTCAGCCGGAGGTTGGGGTTGCTTCGGATTCTCGCCGAGTTTCGTCGGTTTCGGTTCATTCGGTGGAGGTTGAAAATGAAAATGGGATTTCTGAAATCAAGGTGCATTTGGCTAAAGTAGAGAGGGATTGCAGGATTTGTCATTTGGGTTTGGAGAGTAATAGCCAAGAGTCCGGAGTCCCAATCGAATTGGGTTGTTCGTGCAAGGATGATTTGGCTGTTGCTCACAAGCATTGTGCTGAAACCTGGTTCAAAATTAAAGGAAACAAGACATGTGAGATTTGCCATTCCATGGCACAAAACATTGTCGAACCAAATGAGGTTGAGTTAACAGATCAGTCTAATGAATCCAACAACGCCCCCTCAACAACTGCAGCTGCTGCATCAACTCCCCCATCGGACACCCAAAGCTTCTGGCGTGGGCACCGGTTTCTGAATTTTCTGCTTGCTTGTATGGTATTTGCTTTTGTTGTATCTTGGCTGTTTCACTTCAATGTGCCCACGTAG 696 46.7 MAPPEVSQSDIDLEQGNHRRSVSGSDLSADCSVYFSDADEGSCPSQFLSTNGGSYDEFRFSFVSQPEVGVASDSRRVSSVSVHSVEVENENGISEIKVHLAKVERDCRICHLGLESNSQESGVPIELGCSCKDDLAVAHKHCAETWFKIKGNKTCEICHSMAQNIVEPNEVELTDQSNESNNAPSTTAAAASTPPSDTQSFWRGHRFLNFLLACMVFAFVVSWLFHFNVPT 231
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 428421 430525 + Carg12508-RA Car14g00080 159982
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g00080 231 MobiDBLite consensus disorder prediction 1 25 - -
Car14g00080 231 MobiDBLite consensus disorder prediction 173 196 - -
Car14g00080 231 Pfam RING-variant domain 107 158 IPR011016 GO:0008270
Car14g00080 231 ProSiteProfiles Zinc finger RING-CH-type profile. 99 165 IPR011016 GO:0008270
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car07g01016 Car14g00080 CCT
Car07g01016 Car14g00080 ECH
Car06g00229 Car14g00080 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car11g01588 Car-Chr11:12584642 Car14g00080 Car-Chr14:428421 1.40E-22 dispersed
Car13g00066 Car-Chr13:525705 Car14g00080 Car-Chr14:428421 2.04E-47 dispersed
Car14g00080 Car-Chr14:428421 Car01g01140 Car-Chr1:10547988 8.00E-14 dispersed
Car14g00080 Car-Chr14:428421 Car15g00128 Car-Chr15:717305 7.98E-51 wgd
Car14g00080 Car-Chr14:428421 Car06g00229 Car-Chr6:1328421 1.18E-141 wgd
Car14g00080 Car-Chr14:428421 Car07g01016 Car-Chr7:5858833 1.83E-59 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g00080 - - csv:101218915 385.185