Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g00087 ATGGCTGAAGGTATTGAATCCTTCGACCATGTCCCTCAACAAAGCCGGCGCGACAAGCTCCGGGAACATTCCGACCACCGTTCCACTTTCCTCCCTTTCTACGACGACCCTTCATCCTTAATCTCCCCCCCATCCGACTCCACCCATCGTTTCCAATTCCAGCACCACCCTTTCTTCGACCCCCAAATCCAATCCTCCCTCTTACCCGACATCCATCATCAAAACCATTGCTTCACCTCCGAGCCTCTCTCCCTCTCCCTATCCTCTCAGCCCTTCCTAGCCGCCCCTATTCCCGCCGCCCTCCCTCTCGGCCCTTTCACCGGCTACGCTTCCATTTTAAAAGGCTCCAGGTTTTTAAAGCCTGCCCACCAGTTGCTAGAGGAGCTTTGCGATGTGGTTGGCCTTCATCCCGCCTTCCCCTCCTCTTCCTCCCTCAACTCGCCCCCTTCTCCTTCTCCCTCTGCTTTCATGGATGACCCTTCCTCTGACTCTCCAATTCTCGACCACCATCCCCTTGCTTCCTCTCATTCTGCCCCTCCTATCAAATCCACCCTTCTCTCAATGCTCGATGAGATTTACAGGAAATATAAGCAGTACTATCAACAAGTTCAGGAAGTAATGACATCTTTTGAGTACATCTCTGGCCTTGGGAATGCAGCGCCCTATGCAAACCAGGCTATTAAAGTGATGTACAAGCATTTCAAGTGCTTGAAAAATGCAATTCTTGACCAACTTCAATTCAATAAGAAGACTCGTGGTGACTACGGTCAAAGATCCGGTCAGAACCCGGGATTTCTCGACCATCAGCCTGTTTGGCGACCGCAACGGGGGCTTCCCGAACGAGCAGTCACCGTTCTTCGTGCTTGGTTGTTCGAACATTTTTTGCATCCTTATCCTTCTGATACAGACAAGCTTATGTTGGCAAAACAGACTGGTCTGTCTCGTAGTCAGGTATCTAACTGGTTCATTAATGCAAGAGTTAGGCTTTGGAAGCCAATGGTTGAAGAAATATACATGCTTGAAACCAAACAAACACAGAAGAATTTGCATAGAGATGATCGCGACCCCAACAGGCTAAACGATCACCATCCAACCAACTTGCTCGCCATCGATAACCCCTCTAAATCCGCTCAAGAAATTCAAGATACTCCTACCAAACGTACCCGAAACAAACCTCACGAAATGCCAATGGGAAATCACGACGAGCCCTTGAATGTGTCTTACAACGTTTCGAGCCATCCCCATGTAGGCTCAAATGCAAATATGGGGGGGAACAACAATGGAGTTTCTCTAACTCTTGGTCTTCACCAGAACAACAATAACGGCATTGGTGGTGGCTTTTCAGAACCCTTTCCTGTTGGGTTCCCCGTCGCGGCGACTCGACGTTTCGGGCTGGGAATTCAAGGCAGTAGTGATGGGTATGTAATGGGAGGACATTTTGGTAGAGATGTTGTTGGAGGGCAGCTGTTACATGACTTTGTAGGGTGA 1488 49.33 MAEGIESFDHVPQQSRRDKLREHSDHRSTFLPFYDDPSSLISPPSDSTHRFQFQHHPFFDPQIQSSLLPDIHHQNHCFTSEPLSLSLSSQPFLAAPIPAALPLGPFTGYASILKGSRFLKPAHQLLEELCDVVGLHPAFPSSSSLNSPPSPSPSAFMDDPSSDSPILDHHPLASSHSAPPIKSTLLSMLDEIYRKYKQYYQQVQEVMTSFEYISGLGNAAPYANQAIKVMYKHFKCLKNAILDQLQFNKKTRGDYGQRSGQNPGFLDHQPVWRPQRGLPERAVTVLRAWLFEHFLHPYPSDTDKLMLAKQTGLSRSQVSNWFINARVRLWKPMVEEIYMLETKQTQKNLHRDDRDPNRLNDHHPTNLLAIDNPSKSAQEIQDTPTKRTRNKPHEMPMGNHDEPLNVSYNVSSHPHVGSNANMGGNNNGVSLTLGLHQNNNNGIGGGFSEPFPVGFPVAATRRFGLGIQGSSDGYVMGGHFGRDVVGGQLLHDFVG 495
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 459051 461922 + Carg12515-RA Car14g00087 159989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g00087 495 MobiDBLite consensus disorder prediction 142 159 - -
Car14g00087 495 Pfam Homeobox KN domain 289 328 IPR008422 GO:0003677|GO:0006355
Car14g00087 495 MobiDBLite consensus disorder prediction 382 398 - -
Car14g00087 495 Pfam Associated with HOX 112 241 IPR006563 -
Car14g00087 495 MobiDBLite consensus disorder prediction 367 381 - -
Car14g00087 495 MobiDBLite consensus disorder prediction 346 401 - -
Car14g00087 495 MobiDBLite consensus disorder prediction 142 177 - -
Car14g00087 495 ProSiteProfiles 'Homeobox' domain profile. 269 332 IPR001356 GO:0003677
Car14g00087 495 MobiDBLite consensus disorder prediction 1 23 - -
Car14g00087 495 MobiDBLite consensus disorder prediction 346 361 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car03g00349 Car14g00087 CCT
Car07g01000 Car14g00087 CCT
Car03g00349 Car14g00087 ECH
Car07g01000 Car14g00087 ECH
Car06g00239 Car14g00087 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g00458 Car-Chr1:2663523 Car14g00087 Car-Chr14:459051 5.35E-78 dispersed
Car13g00181 Car-Chr13:2110060 Car14g00087 Car-Chr14:459051 5.35E-70 dispersed
Car14g00087 Car-Chr14:459051 Car20g00129 Car-Chr20:717400 1.97E-66 dispersed
Car14g00087 Car-Chr14:459051 Car03g00349 Car-Chr3:4418841 1.49E-84 wgd
Car14g00087 Car-Chr14:459051 Car06g00239 Car-Chr6:1364836 0 wgd
Car14g00087 Car-Chr14:459051 Car07g01000 Car-Chr7:5698858 2.38E-103 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4592 PF07526 POX 4.00E-30 No_clan Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g00087 - - cmax:111481510 911.753