Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g00101 ATGGCCCAACTCTGTTTTCTCTGTTTCTTCTTCTTCTTCCTCTTTTTCGCCGGCCCCGCCGCATCTCAGCAGCTCTACTTCGCCGGATTCCACGACTCCGCCGCCGTTGCTGCCAACTTAACCCTCACTGACATCGCCAAGATCGAGCAGAACGGAATCTTAAAGCTCACGAACGACACCAGTCGATTACAGGGTCATGCCTTTTACAGTTCCCCTGTTCGCTTCAAAAACTCCTCCGACGGCAAAGCTTTTTCGTTCTCCACCGCTTTTGCCATCGCCGTCGTCCCCGAGTACCCGACCCTCGGCGGCCATGGCCTCGCCTTCACCATTGCGCAGTCGAAGAACCTCCGTGGACTTCCCAGTCAGTATTTGGGCCTTCTCAATGCGACTGACGTTGGAAACTTCTCGAACCATCTCTTCGCCGTGGAGTTTGACACCGTTCAGGATTTCGAGTTCGGCGACATCAACGACAACCACGTCGGAATTAATCTCAACAATATGGTCTCTAATGCCTCCACCACCGCTTCCTATTTCGTTGATGATGGACCCACCAAGCAAAACCTGACCCTAAAAAGTGGGAGACCGATTCAAGCTTGGATCGATTACAATTCCGCTGTAAATTCCCTGACGGTGGCGCTTTCTCCGTTCTCCACTAAACCCAAGAAGCCGATTCTGTCGTTTAATGTAGATCTCTCTCCGATTCTTCACGAGTTTATGTATGTTGGGTTCTCCGCCTCGACTGGGCTTCTTGCAAGCTCTCACTATGTGTTGGGATGGAGTTTCAGTATGAATGGACCAGCCCAATCCCTGGATCTTTCTTCTTTGCCTTCTGTTCCTGGTCCGAAGAAGAAGCACACTGCCTTTACAATTGGGGTTTCTGTTGGGGCCGTTTTGATTGTAGCAATTGCGATTGGCGTTGCTGTTTTTATCGTATGGAAGATAAAAAACGCGGACATAATCGAGGCCTGGGAGCTTGAAATCGGCCCTCATCGGTACTCTTACAAGGAGCTCAAGCAGGCGACTAAACGATTTAGGGACAAAGAGCTTCTAGGGCGCGGTGGGTTTGGGAAAGTTTATAAAGGGACTTTGCGGAAATCGAAAACCGTAGTGGCTGTGAAGCGAATCTCTCACGAATCGAAACAGGGCCTGAGGGAATTTGTGTCGGAAATCGCTAGCATTGGCCGGCTTCGACACCGGAACTTAGTTCAGTTGCTGGGATGGTGTCGCCGCCGTGGGGATCTGCTTCTGGTTTATGAATTTATGGCTAATGGGAGCTTGGATAGCTACATTTTCGACGAGCCGGAATCGGTTCTGAGTTGGGAACAGAGATTCAGAATCATCAAGGGCGTCGCCTCTGGTTTGCTGTACTTGCACGAAGGCTACGAGCAGGTGGTGATTCATAGAGATGTGAAGGCCAGTAATGTCCTGCTCGACAGCGAGATGAATGGAAAGCTCGGCGATTTCGGCCTGGCTCGGCTATACGAACACGGGGCGAACCCGAGCACGACTCGGGTGGTGGGAACTCTGGGATATCTGGCGCCGGAGCTACACAGAACAGGGAAAGCCACGACTAGCTCAGATGTGTACGCCTTCGGCGCACTTCTTCTGGAAGTGGCCTGCGGACGTCGACCGATCGACCCAAAATCTCGGTCGGAGGAGCTGGTGCTGGTGGATTGGGTGTGGGAGAATTACAGGGAAGGGAGATTAATGGAAGCAATGGATCCAAAACTGAAAGGGGATTACAATGCGGTGGAGGCAGTGATGATATTGAAATTGGGGTTGTTCTGTTCGAACGATTCGGCGGCGGGGCGGCCGAGTATGAGGCAGGTGGTGCGGTATTTGGAGGGGGAGAATGGAGTGCCGGAGGAGATATCGGCACCGAAAGTGGTGGAGGGAGGGAAGAACGGGGAAGGGTTCGATGATTTTGTGAATTCGTTTGGTTCAACATGCTCGCATTCGCGTACCGGAAATGATAATAATAATAATATGGATACGGATATGAGTTTTGCTTCATTTTCCACTTCTCCTCTTTCGCTTCTCAATGGCAGAGACTGA 2055 51.39 MAQLCFLCFFFFFLFFAGPAASQQLYFAGFHDSAAVAANLTLTDIAKIEQNGILKLTNDTSRLQGHAFYSSPVRFKNSSDGKAFSFSTAFAIAVVPEYPTLGGHGLAFTIAQSKNLRGLPSQYLGLLNATDVGNFSNHLFAVEFDTVQDFEFGDINDNHVGINLNNMVSNASTTASYFVDDGPTKQNLTLKSGRPIQAWIDYNSAVNSLTVALSPFSTKPKKPILSFNVDLSPILHEFMYVGFSASTGLLASSHYVLGWSFSMNGPAQSLDLSSLPSVPGPKKKHTAFTIGVSVGAVLIVAIAIGVAVFIVWKIKNADIIEAWELEIGPHRYSYKELKQATKRFRDKELLGRGGFGKVYKGTLRKSKTVVAVKRISHESKQGLREFVSEIASIGRLRHRNLVQLLGWCRRRGDLLLVYEFMANGSLDSYIFDEPESVLSWEQRFRIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSEMNGKLGDFGLARLYEHGANPSTTRVVGTLGYLAPELHRTGKATTSSDVYAFGALLLEVACGRRPIDPKSRSEELVLVDWVWENYREGRLMEAMDPKLKGDYNAVEAVMILKLGLFCSNDSAAGRPSMRQVVRYLEGENGVPEEISAPKVVEGGKNGEGFDDFVNSFGSTCSHSRTGNDNNNNMDTDMSFASFSTSPLSLLNGRD 684
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 517786 519930 + Carg12529-RA Car14g00101 160003
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g00101 684 Pfam Protein kinase domain 345 552 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car14g00101 684 Pfam Legume lectin domain 24 275 IPR001220 GO:0030246
Car14g00101 684 ProSiteProfiles Protein kinase domain profile. 344 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car14g00101 684 ProSitePatterns Serine/Threonine protein kinases active-site signature. 465 477 IPR008271 GO:0004672|GO:0006468
Car14g00101 684 ProSitePatterns Protein kinases ATP-binding region signature. 350 373 IPR017441 GO:0005524
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00335 Car-Chr3:4326538 Car14g00101 Car-Chr14:517786 3.92E-14 dispersed
Car06g00317 Car-Chr6:1745449 Car14g00101 Car-Chr14:517786 5.52E-137 dispersed
Car13g00526 Car-Chr13:7275249 Car14g00101 Car-Chr14:517786 5.65E-166 dispersed
Car14g00101 Car-Chr14:517786 Car18g00348 Car-Chr18:2145325 9.95E-158 dispersed
Car16g00925 Car-Chr16:7586734 Car14g00101 Car-Chr14:517786 1.89E-140 dispersed
Car19g00365 Car-Chr19:5520194 Car14g00101 Car-Chr14:517786 1.01E-129 dispersed
Car19g00640 Car-Chr19:7748770 Car14g00101 Car-Chr14:517786 7.56E-115 dispersed
Car14g00101 Car-Chr14:517786 Car14g00102 Car-Chr14:521162 0 tandem
Car11g01167 Car-Chr11:9358980 Car14g00101 Car-Chr14:517786 4.63E-122 transposed
Car14g00101 Car-Chr14:517786 Car03g00361 Car-Chr3:4495009 0 wgd
Car14g00101 Car-Chr14:517786 Car07g00987 Car-Chr7:5616797 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89309 PF00069 Pkinase 9.80E-48 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g00101 - - csv:101223168 1183.32