Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g00115 ATGGATCCACGCTTTACACGACAAGCTGGTTCCACGAATGAAATTCTTATAGGTAATCGCCCCTTTGCGGTTCAAGCACAAGAGAATGCTCTTGGAAGGCCCATGTTTCAGGATACCGTTTTGAGTCATAACTTTGAAGAATTTAATTGCTTTCCTCTCGATCCATCGCCGAATAACATGGCCTCAAGTTCCAGTATTAGAACCTCATCTTCTAATGAGGCGAGCCATGAGGAAGATTATCTGGAAGATTACGATTTCTCTGATGCTGTTTTGAGATTCATTAATCAGATTCTCATGGAAGAAGATATGGAGGACAAGACTTGCATGCTTCAAGATTCTTTGGATCTTCAAGCTGCTGAGAAATCATTCTACGAGGTCCTTGGAAAAAAGTATCCTCCTTCTCCAGAACCGAATAGATCTCTGGCCAATCAATACAGTGATAGCTTCTATGAAGAACTTTGTGGAGATAGTATTAATTGCCTGAATAGTTATCGTAATACTTTTTATTATGGTGATGATAACCCTTTTCAAAGTCTGAGTGAGGATGTATTTCAAATCAGAAGCACTTTAGATGATATCATTTCTCCATCATCTCATAGCTCCTCGAATAGTATTATTAGTGGGGCTGATGGGTGGGTGGACTTCTCGAATAATACAATTCTAGTCCCTGAGCCTAATAACAGAAGCCAATCCATTTGGCAGTTTCAAAAAGGGTTTGAAGAGGCAAGCAAATTTTTACCTGGTGAAAACAACTTGTGTCTTGATTTTGAGGTAAATGAGCCAGCAACTCAGGGTCCGGAGGAGGAAACGAGCGAGATATATTTGAAGGCAGGAAGAAAGGATCAGAAGAGTGTTTTGTCACTTGAATCACGTGGAAGAAAGAATCCTCATGATGAGGATGGAGATTTGGAAGAAGAGAGATGCCGCAAGCAAGCAGCTCTATTTACAGAGTCAACCTTGCGATCTAAGATGTTTGATATTGTGTTGCTTTGTAGTGCAGGGGAGGGGCGTGAACGGTTAGTTTCATTTCGACAGGAATTACAGAATGCTAAAATCAAAAGCATGCTGCAGAATGGGCAACTAAAAGAGTTTAGAGGTGGGAGGGGTCGTCGGAAGAAGCATAGTGGGAAAAAGGAGGTTGTGGATTTGAGAACTCTTCTAATTAGCTGTGCTCAAGCTATAGCAGCTGATGACCATAGGAATGCCAGTGAGCTTCTAAAGAAGATCAGGCAACATGCTTCTCCTTTTGGGGATGGAAATCAGAGGTTGGCTAGTTGTTTTGCTGATGGTCTGGAGGCACGCTTGGCAGGTACTGGTAGCCAGATTTACAAAGGTCTAGTTAATAAAAGAACATCTGCTGCCGATGAATTGAAAGCTTACCACTTGTACCTTGCTGCATGCCCATTTAGAAAGATCTCTAATTTTACTTCAAACAGGACTATAATGATTGCTGCAGAGAATGCAACGAAGCTTCATGTCATAGATTTTGGTATCCTTTACGGTTTCCAGTGGCCTACTTTAATCCAGAGATTGTCATGGAGAGAAGGTGGACCTCCAAGGCTTCGAATTACTGGAATAGAATTTCCCCAGCCTGGATTTCGTCCTGCGGAGAGAGTTGAGGAGACAGGTCGTCGCTTGGCGGCCTATGCAGAGAGTTTCAACGTGCCATTTGAGTATAATGCTATAGCAAAAAAATGGGAAAATATTTCTGTGGAAGAACTCAATATCCATCAAGATGAGTTCCTCGTTGTGAACTGTTTGTATCGAGCAAAAAATTTGTCTGATGAAAGTGTTGCCACAGAGAGTGCCAGAAGTTCTGTTTTTAGATTGATACACAAAATTAAACCCAACTTATTCATCAGTGGCGTTGTCAACGGGGCATACAATGCACCTTTCTTCGTTACCCGATTTCGAGAGGCATTGTTTCACTTTTCTGCTATCTTTGATATGCTTGAAACTGTTGTACCTCGTGAGGATTGGGAGAGAATGCTGTTGGAGAGAGAGATCTTTGGCAGGGAGGCTTTAAATGTTATAGCATGTGAGGGATGGGAGAGAGTGGAAAGACCAGAAACATACAAGCAGTGGCAATTTTGGATCATGAGGGCTGGATTTGTGCAACTGCCTTTTTATCCTGAGATTTTTGAGAGAGCAGTTGAAAAGGTGCGGTCAAGTTACCACAGAGATTTTTTGATTGATGAAGATAGTAGATGGATACTGCAGGGATGGAAAGGTCGAATTATATATGCCATCTCTGCATGGAAACCTGCTACAGAGTAA 2277 41.94 MDPRFTRQAGSTNEILIGNRPFAVQAQENALGRPMFQDTVLSHNFEEFNCFPLDPSPNNMASSSSIRTSSSNEASHEEDYLEDYDFSDAVLRFINQILMEEDMEDKTCMLQDSLDLQAAEKSFYEVLGKKYPPSPEPNRSLANQYSDSFYEELCGDSINCLNSYRNTFYYGDDNPFQSLSEDVFQIRSTLDDIISPSSHSSSNSIISGADGWVDFSNNTILVPEPNNRSQSIWQFQKGFEEASKFLPGENNLCLDFEVNEPATQGPEEETSEIYLKAGRKDQKSVLSLESRGRKNPHDEDGDLEEERCRKQAALFTESTLRSKMFDIVLLCSAGEGRERLVSFRQELQNAKIKSMLQNGQLKEFRGGRGRRKKHSGKKEVVDLRTLLISCAQAIAADDHRNASELLKKIRQHASPFGDGNQRLASCFADGLEARLAGTGSQIYKGLVNKRTSAADELKAYHLYLAACPFRKISNFTSNRTIMIAAENATKLHVIDFGILYGFQWPTLIQRLSWREGGPPRLRITGIEFPQPGFRPAERVEETGRRLAAYAESFNVPFEYNAIAKKWENISVEELNIHQDEFLVVNCLYRAKNLSDESVATESARSSVFRLIHKIKPNLFISGVVNGAYNAPFFVTRFREALFHFSAIFDMLETVVPREDWERMLLEREIFGREALNVIACEGWERVERPETYKQWQFWIMRAGFVQLPFYPEIFERAVEKVRSSYHRDFLIDEDSRWILQGWKGRIIYAISAWKPATE 758
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 563954 566230 - Carg12543-RA Car14g00115 160017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g00115 758 Pfam GRAS domain family 383 754 IPR005202 -
Car14g00115 758 ProSiteProfiles GRAS family profile. 374 754 IPR005202 -
Car14g00115 758 MobiDBLite consensus disorder prediction 285 305 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car06g00255 Car14g00115 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car13g00086 Car-Chr13:634221 Car14g00115 Car-Chr14:563954 0 dispersed
Car14g00115 Car-Chr14:563954 Car20g00575 Car-Chr20:3226120 1.04E-69 dispersed
Car01g00558 Car-Chr1:3292228 Car14g00115 Car-Chr14:563954 3.78E-13 wgd
Car14g00115 Car-Chr14:563954 Car02g00572 Car-Chr2:4374846 0 wgd
Car14g00115 Car-Chr14:563954 Car20g00340 Car-Chr20:1938505 0 wgd
Car14g00115 Car-Chr14:563954 Car06g00255 Car-Chr6:1446580 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4594 PF03514 GRAS 5.20E-115 CL0063 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g00115 - - csv:101205887 1271.53