Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g00128 ATGAATTTCTCCTCCATTCCTCCTTATCTTGATCCTTCCAACTGGCACCAGCAACTCACCCATCAACTGGGAACCACCACCACCGGAGTTAGCTCTCAGCTCCTTCCTCCACCCCCTCCTCCGCCTCCTCCCCCACCTCCCCCTCCCCCCCATGGCGTCGGTGCTCCCACTTCCATCCGCCCCGGTTCGATGGCCGAGCGAGCTCGAATGGCTAATATTCCCATGCCTGAGGCAGCATTGAAATGCCCAAGATGTGATTCAACCAACACTAAGTTCTGCTACTTCAACAATTACAGCCTCACTCAACCTCGCCACTTTTGTAAGACATGTCGAAGGTACTGGACTAGAGGTGGAACGCTGCGAAGCGTTCCGGTCGGGGGCGGGTGCCGGAGAAACAAAAGAAGCAAAGGGAGAAGTTCCAAGTCGCCGCCGGTCAGTTCCGACCGACAACAAACCTGTGGTTCAGGGAATTCCTCATCGAGTGCAATAGCTTCCAACAATAGTGGAGGTCTTTCCCCACAGATTCCACCTCTCCGCTTCATGGCTCCTCTCCACCAACAACTCAGCGACTTCGACATCGGTGGCTTCAACTACGGTGGTGGCCTCTCAGCTCCGGCCACCGTTACCGGCGACCTGAATTTCCAATTGGGCAACACTAATTTAGGTGGAGGAACAAGCATTGGATCTCTCTTGGGATTTGACCAACAATGGCGGCTCCAACAACAAGCTCCTCAATTTCCCTTCTTTTCCGGGTTAGACCCTTTCGACGGTGGTAGCGGTAGCGGCGGTGACGGACCCAGCTGGGAAATGAGGCAAAAATTACCATCAAGCTCAAGGAATTTAACCCAAATGGGGAATTCAGTAAAAATGGAAGAAACCCCAGATCAAGGTAATAACATTGGAAGACAATTAGTTGGCAATGAACAATATTGGAGCAGCGGATCAATGGGATGGTCGGATCCTTCTGGTTTCAGTTCTTCATCTTCAACAAGAAACCCATTATAG 1005 51.84 MNFSSIPPYLDPSNWHQQLTHQLGTTTTGVSSQLLPPPPPPPPPPPPPPPHGVGAPTSIRPGSMAERARMANIPMPEAALKCPRCDSTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGTLRSVPVGGGCRRNKRSKGRSSKSPPVSSDRQQTCGSGNSSSSAIASNNSGGLSPQIPPLRFMAPLHQQLSDFDIGGFNYGGGLSAPATVTGDLNFQLGNTNLGGGTSIGSLLGFDQQWRLQQQAPQFPFFSGLDPFDGGSGSGGDGPSWEMRQKLPSSSRNLTQMGNSVKMEETPDQGNNIGRQLVGNEQYWSSGSMGWSDPSGFSSSSSTRNPL 334
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 617199 618504 + Carg12556-RA Car14g00128 160030
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g00128 334 ProSiteProfiles Zinc finger Dof-type profile. 80 134 IPR003851 GO:0003677|GO:0006355
Car14g00128 334 MobiDBLite consensus disorder prediction 271 334 - -
Car14g00128 334 MobiDBLite consensus disorder prediction 139 169 - -
Car14g00128 334 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 4 330 IPR045174 GO:0003700|GO:0006355
Car14g00128 334 ProSitePatterns Zinc finger Dof-type signature. 82 118 IPR003851 GO:0003677|GO:0006355
Car14g00128 334 Pfam Dof domain, zinc finger 79 134 IPR003851 GO:0003677|GO:0006355
Car14g00128 334 PANTHER DOF ZINC FINGER PROTEIN DOF3.6 4 330 - -
Car14g00128 334 SUPERFAMILY Formin homology 2 domain (FH2 domain) 39 47 - -
Car14g00128 334 MobiDBLite consensus disorder prediction 33 55 - -
Car14g00128 334 MobiDBLite consensus disorder prediction 24 60 - -
Car14g00128 334 MobiDBLite consensus disorder prediction 121 169 - -
Car14g00128 334 MobiDBLite consensus disorder prediction 248 334 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car03g00379 Car14g00128 CCT
Car03g00379 Car14g00128 ECH
Car06g00263 Car14g00128 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g02541 Car-Chr4:20112631 Car14g00128 Car-Chr14:617199 3.33E-55 dispersed
Car13g00103 Car-Chr13:742863 Car14g00128 Car-Chr14:617199 1.11E-52 dispersed
Car13g00167 Car-Chr13:1686357 Car14g00128 Car-Chr14:617199 5.57E-39 dispersed
Car01g00540 Car-Chr1:3203824 Car14g00128 Car-Chr14:617199 2.02E-58 wgd
Car14g00128 Car-Chr14:617199 Car15g00373 Car-Chr15:1950676 6.66E-49 wgd
Car14g00128 Car-Chr14:617199 Car02g00587 Car-Chr2:4460372 1.68E-44 wgd
Car14g00128 Car-Chr14:617199 Car20g00359 Car-Chr20:2020738 1.65E-41 wgd
Car14g00128 Car-Chr14:617199 Car03g00379 Car-Chr3:4584565 6.66E-53 wgd
Car14g00128 Car-Chr14:617199 Car04g00201 Car-Chr4:1109912 2.00E-46 wgd
Car14g00128 Car-Chr14:617199 Car06g00263 Car-Chr6:1493595 2.22E-142 wgd
Car14g00128 Car-Chr14:617199 Car07g00965 Car-Chr7:5466298 1.97E-32 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4596 PF02701 zf-Dof 6.10E-32 No_clan Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g00128 - - cpep:111791192 508.834