Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g00139 TTATGTCTATCTCGTCCAGAGCTAAATCTTGACCGCGAACCAAAAGCTTTTCCATTTCGGTTTTTTGCCGCCCTGCTCGTCTCTCACGTTTTCGCGGACAAAACCCTAGCCCTAACTAATCCGCTCTTCCTCGTATTCCGATCGATTTTACTCTATACAAACCTGAAATCTGCTGCTGACTGTGCAGATCTCAGATCCGTAGTTGTTGGGAATTCAATCGGAGGCTCTGTTCTTCTTATCGGATTGTTCCTATTTGGTTTCAAGAAGGGCGTCGAGATTTGGAGGAAAATATATTGGATGGGAGAAGAAGCAGCTGGTTTGGCTGCAGTTACAAATGAGCCGTTGGGGAAAGAGAGCGCTCCAAGTACCGAATTGAAGCGGGACCATCAGTGTCTTGATGAAGATACGGAACCCGAGGCTTTTCACAACAAGAAGCAGGCTAAAGAAGTGTCGAATGAAGATGTTCGTTCAGAAGTTTCGAATCCTGTAATTTCTCCGAAAGGGAATCATTTCCATGATATTACCAGCCAACCTGAGGAGCAAGAAAATACCAACCAAGTTGAGCGTGGGGACCTTACCTCGGCTTGTTCGGGTAATTCAAGCTCGGAGGACATCTCTAGCAATGGAGTTCGTTGCCAGAATGACACGCCTCGAAATGACGTTGATATGTGTGATGTTGATGAGGTCTCTCGTTTTGTGATTGAAATACCCAAGCATGCTAGTTCAACTGGAATTAGAAAAATTACGTTCAAGTTCAGCAAAAAAAAGGACAAAAATGACGCATCCATGTCAGCAGACAAAGTTCGTTCATATGGGAACTTCGACAAGGATTGTAAACCAGAACCTTCATTGGTGGACGATGCTTGTACGGAGACATCTGCACATAGCTGGGAAGGCATTGCTGAGAGCAGCAGGTATCCTTTAGGTTCAAATAAAATGGAATTGAAAATGTCGAAGAAGGTTTTACCAAACAATTACCCGTCGAATGTTAAAAAGCTACTGTCGACTGGTATACTTGATGGAGCTCGAGTCAAGTATATATCTACGACAAGTGAGATGAAGCTACATGGTATTATAAATGGCGGAGGTTATATGTGCGGATGTTCAATATGCAATTTTACAACTATCCTCAGTGCTTATGAGTTTGAGCAGCATGCTGGTTTCAAGACTAGACATCCAAATAATCATATATACCTGGAGAATGGGAGGCCAATTTATAGTGTCATACAGGAAATTAAGAGTGCACCTCTTAGCATATTAGATGAAGTGATTAAGGAAGTAGCGGGTTCATGTATTAACGTGGATTCATTTGAGGTTTGGAAAGCAAATTTCCACCAGAACAGTGCAATTATTGAAGTCAAAAATGATGATGTGAAGGTTCCTAAATTGTCACATCCCATTGACAGGCCAATCCCTAATTTATCCAACCCAGTCATGCAACAGAAGAAAACGGCAGAAAAAGGCACAAAAAGAAGGGATAATGATCTTCACAGGCTACTTTTCATGCCAAATGGGCTTCCAGATGGGGCTGAGCTGGCATACTTCGTCAAAGGACAGAGAATACTTGTAGGCTACAAGCAAGGAAATGGCATACTCTGTAGTCACTGTAATCGAGAGATCAGCCCTTCACAGTTTGAAGCCCATGCAGGGATGGCTGCCAGACGTCAGCCCTACCGCCACATTTATACTACAAATGGACTTACGCTTCATGATATAGCCATTTCCTTGGCTAGTGGGCAAAAACTTACCACAGGAGATAGTGATGATATGTGCGCTGCATGTGGTAATGGAGGGGATTTGATTTTCTGTGATCGCTGCCCTCGAGCTTTCCATACAGGCTGCCTGCATCTACAGAATGTTCCTGAAGGAGTTTGGTCTTGCCCAAACTGTAGAGATAAAGTGGGTTCCAATTTGAAGGCTCCTTCCGGAGGTTCTTTGAGTTTTTCAAAACCAATTGTATTTAGGTTGACACGAGTTGTTAAAGCACCTGAATATGAAATTGGTGGTTGTGTTGTGTGCAGGCGACATGATTTCAGTGCTGCTAAATTTGATGATCGAACTGTACTTCTTTGTGATCAATGTGAAAGAGAATTCCATGTAGGCTGTCTGCGGGATAGTGGGTTATGTGATCTGAAGGAACTTCCCAAGGACAAGTGGTTCTGCTGTGACGAGTGCAGTAATATCCATGTGGCTTTTCAGAATACAGTTTTGAACGGGGCACAGATCATTCCAGATTCCTTATCAGATTTAATAATTAGGAAGCATGTTGGAAAAGGATTACCAGTCGATGGAGCTCTTAATGATGTTCGGTGGCAAATTTTAAGTGGAAAAAGTCGCTTCCCAGAAGATCTTCCATTTCTTTCAAGGGCAACTGCTATTTTTCGAGAATGTTTTGATCCTATTGTTGCAAAATCAGGTCGTGATCTGATTCCTGTTATGGTTTATGGGAGAAATATATCTGGGCAAGAGTTTGGAGGAATGTATTGCGTTGTTTTAATTGTGAGATCGATAGTTGTATCGGCTGGTCTTCTTAGGATATTTGGTCGTGAAGTTGCTGAGCTTCCTATCGTTGCGACAAGTAGAGAACATCAGGGCAGGGGTTATTTCCAAGTATTGTTTTCCTGTATAGAGCGGCTACTTTCTTCCCTGAACGTGCAAAACCTTGTACTCCCTGCAGCCGAGGATGCTGAATCAATTTGGACAAAGAAATTGGGCTTCAGAAAGATGAGTGAAGAACAATTGATGAAGTATATGAGGGAGGTCCAGCTGACGATCTTCAACGGAACATCGATGCTAGAGAAGGTGGTCCAGCAGTCGACTTCGGCTTCCGAAGTGTAA 2838 43.02 LCLSRPELNLDREPKAFPFRFFAALLVSHVFADKTLALTNPLFLVFRSILLYTNLKSAADCADLRSVVVGNSIGGSVLLIGLFLFGFKKGVEIWRKIYWMGEEAAGLAAVTNEPLGKESAPSTELKRDHQCLDEDTEPEAFHNKKQAKEVSNEDVRSEVSNPVISPKGNHFHDITSQPEEQENTNQVERGDLTSACSGNSSSEDISSNGVRCQNDTPRNDVDMCDVDEVSRFVIEIPKHASSTGIRKITFKFSKKKDKNDASMSADKVRSYGNFDKDCKPEPSLVDDACTETSAHSWEGIAESSRYPLGSNKMELKMSKKVLPNNYPSNVKKLLSTGILDGARVKYISTTSEMKLHGIINGGGYMCGCSICNFTTILSAYEFEQHAGFKTRHPNNHIYLENGRPIYSVIQEIKSAPLSILDEVIKEVAGSCINVDSFEVWKANFHQNSAIIEVKNDDVKVPKLSHPIDRPIPNLSNPVMQQKKTAEKGTKRRDNDLHRLLFMPNGLPDGAELAYFVKGQRILVGYKQGNGILCSHCNREISPSQFEAHAGMAARRQPYRHIYTTNGLTLHDIAISLASGQKLTTGDSDDMCAACGNGGDLIFCDRCPRAFHTGCLHLQNVPEGVWSCPNCRDKVGSNLKAPSGGSLSFSKPIVFRLTRVVKAPEYEIGGCVVCRRHDFSAAKFDDRTVLLCDQCEREFHVGCLRDSGLCDLKELPKDKWFCCDECSNIHVAFQNTVLNGAQIIPDSLSDLIIRKHVGKGLPVDGALNDVRWQILSGKSRFPEDLPFLSRATAIFRECFDPIVAKSGRDLIPVMVYGRNISGQEFGGMYCVVLIVRSIVVSAGLLRIFGREVAELPIVATSREHQGRGYFQVLFSCIERLLSSLNVQNLVLPAAEDAESIWTKKLGFRKMSEEQLMKYMREVQLTIFNGTSMLEKVVQQSTSASEV 945
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 648141 656405 + Carg12567-RA Car14g00139 160041
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g00139 945 MobiDBLite consensus disorder prediction 464 491 - -
Car14g00139 945 ProSiteProfiles Zinc finger PHD-type profile. 588 633 IPR019787 -
Car14g00139 945 MobiDBLite consensus disorder prediction 178 215 - -
Car14g00139 945 ProSiteProfiles Zinc finger PHD-type profile. 667 728 IPR019787 -
Car14g00139 945 ProSitePatterns Zinc finger PHD-type signature. 670 725 IPR019786 -
Car14g00139 945 MobiDBLite consensus disorder prediction 120 155 - -
Car14g00139 945 Pfam PHD-finger 590 632 IPR019787 -
Car14g00139 945 ProSitePatterns Zinc finger PHD-type signature. 591 630 IPR019786 -
Car14g00139 945 Pfam Tify domain binding domain 357 411 IPR032308 -
Car14g00139 945 Pfam Tify domain binding domain 524 573 IPR032308 -
Car14g00139 945 MobiDBLite consensus disorder prediction 115 216 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car06g00270 Car14g00139 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g01151 Car-Chr2:7906975 Car14g00139 Car-Chr14:648141 3.76E-141 dispersed
Car04g01102 Car-Chr4:6347091 Car14g00139 Car-Chr14:648141 3.05E-42 dispersed
Car06g00356 Car-Chr6:1950702 Car14g00139 Car-Chr14:648141 4.93E-16 dispersed
Car14g00139 Car-Chr14:648141 Car20g00471 Car-Chr20:2608235 0 dispersed
Car14g00139 Car-Chr14:648141 Car02g00597 Car-Chr2:4517071 6.74E-41 wgd
Car14g00139 Car-Chr14:648141 Car20g00370 Car-Chr20:2061582 6.28E-43 wgd
Car14g00139 Car-Chr14:648141 Car04g00208 Car-Chr4:1159173 3.18E-44 wgd
Car14g00139 Car-Chr14:648141 Car06g00270 Car-Chr6:1526693 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4597 PF16135 TDBD 3.30E-12 No_clan Car TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g00139 - - cmax:111481523 1654.03