Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g00161 ATGGCTTTTGCAGAACGTGGAGCTTCAAACCCAATGCTGGATCTTAACCTCCAAGTTGTTTCCTCTGATTCGGTTGAGTTGGTTACTGAGAGGCTTTTCCAGTTTCCGCCGATCAGAATGGAAAGCGCCGGTAGCTTTAACGGCGATCTTTCTGCCAGCACTACCGGTGACGAGGACTCATCTTCCAACGCTGATGAAGCTTTCCCGTTCGCCTTCGGTAAGGACTGCGCGGTTCAGGAAAACTTAACGGCCAAGTCACTCTGTATTTCCGATAACCACCGCGATCAGACGATGGAGCTTTTTCCATTAACAGGCGGGTTATCTTCTGGTTCGAGTTCTCAGAAGCAGTGGCTGGAGGTTTCTCCGCCGGAATTTCACTATTGGGGAGGAGCGCCGGAGCGGCGAATAACAGCACCGCCAGGGCAACAACAGCATCAGCCGATGAGGAAGAATCGGCGAGGTCCAAGGTCTCGGAGTTCGCAGTATCGTGGCGTTACCTTTTATCGAAGAACAGGAAGATGGGAATCGCATATTTGGGACTGCGGGAAACAAGTTTATCTGGGTGGTTTCGATACTGCACATGCGGCTGCTAGGGCGTATGATCGGGCGGCGATCAAGTTTCGGGGGGTCGATGCAGATATCAATTTCAATGTCAGTGATTATGATGAAGATATTAAGCAGGTGGGATTGGCTAAGTTAATACTCATTACTGTCAGAACTTCAAACTCTTTCTCTAACGCCATTGATGAAGAGCTTTACTCTTGGCTGCCATTAATGTCCCAGATGAGTAATTTTACCAAGGAAGAGTTTGTTCATATTCTTCGCCGCCATAGCACTGGATTTTCGAGGGGGAGCTCCAAGTACAGAGGGGTCACTCTGCATAAATGTGGGCGATGGGAGGCTCGGATGGGCCAGTTCTTGGGCAAGAAGTACATATATCTTGGTCTCTTTGATAGTGAGATTGAGGCTGCAAGAGCATATGACAAAGCTGCCTTGAAATGCAATGGTAAGGAGGCTGTCACAAACTTTGAACCAAGTTCTTATGTTGCAGAGATGGCTTCTGAGGCGGCTGGCGCAGCAGACAACAACCAGATTCTTGATCTGAACTTGGGAATTGCTCCCCCAAATCTTTGTGAGGCTCAAAGTGAGAGCATTGCCATGTTTGAGAGAAGAGCTATGCCTGAGAACTCTGTTTCAGCAGCAATTAGATCATCCCATTCCCAGCCGTATAGCTTCGCAGTGCCTTCCAATTACCATTCTCCTTGGAGTGTTTCAAACTCCAGTTTCTTTCCCAACTCAAGGGTAATAATTATCACTACATACGCCATTTTGTTTATATTCAGCTTACCTAGGAACTCTGTGAGTAAGTTGTTTTATTATGAAAGAGCAACAGAGATGAGGATGGGGGTTGGGGTTGGGGTTGGGGTTGGGTCATGGGAGTGGCAAATCCATGGCCACCCAAGTGGAACAACCTCTGTGCCACTCTTCTCTGCTGCAGCATCATCAGGATTCCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCGACTGTCATTCCATCAGCTTCATCTGGTGTTGGTGAAACCCATTTCCCAGCAATCTTCTACTGTAGGAGTTGA 1620 47.78 MAFAERGASNPMLDLNLQVVSSDSVELVTERLFQFPPIRMESAGSFNGDLSASTTGDEDSSSNADEAFPFAFGKDCAVQENLTAKSLCISDNHRDQTMELFPLTGGLSSGSSSQKQWLEVSPPEFHYWGGAPERRITAPPGQQQHQPMRKNRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVDADINFNVSDYDEDIKQVGLAKLILITVRTSNSFSNAIDEELYSWLPLMSQMSNFTKEEFVHILRRHSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSEIEAARAYDKAALKCNGKEAVTNFEPSSYVAEMASEAAGAADNNQILDLNLGIAPPNLCEAQSESIAMFERRAMPENSVSAAIRSSHSQPYSFAVPSNYHSPWSVSNSSFFPNSRVIIITTYAILFIFSLPRNSVSKLFYYERATEMRMGVGVGVGVGSWEWQIHGHPSGTTSVPLFSAAASSGFPSSSSSSSSSSSTVIPSASSGVGETHFPAIFYCRS 539
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 752508 755656 + Carg12589-RA Car14g00161 160063
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g00161 539 MobiDBLite consensus disorder prediction 46 62 - -
Car14g00161 539 MobiDBLite consensus disorder prediction 505 525 - -
Car14g00161 539 MobiDBLite consensus disorder prediction 505 524 - -
Car14g00161 539 ProSiteProfiles AP2/ERF domain profile. 161 217 IPR001471 GO:0003700|GO:0006355
Car14g00161 539 ProSiteProfiles AP2/ERF domain profile. 287 344 IPR001471 GO:0003700|GO:0006355
Car14g00161 539 Pfam AP2 domain 286 335 IPR001471 GO:0003700|GO:0006355
Car14g00161 539 Pfam AP2 domain 161 209 IPR001471 GO:0003700|GO:0006355
Car14g00161 539 MobiDBLite consensus disorder prediction 44 64 - -
Car14g00161 539 MobiDBLite consensus disorder prediction 132 161 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car14g00161 Car-Chr14:752508 Car14g00972 Car-Chr14:6919663 2.52E-10 dispersed
Car14g00161 Car-Chr14:752508 Car02g00621 Car-Chr2:4684407 9.99E-127 wgd
Car14g00161 Car-Chr14:752508 Car06g00295 Car-Chr6:1651111 1.03E-142 wgd
Car14g00161 Car-Chr14:752508 Car07g00921 Car-Chr7:5119172 2.23E-106 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4601 PF00847 AP2 1.00E-09 CL0081 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g00161 K09284 - csv:101211242 675.626