Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g00181 ATGAGTGTGATCGACCTTTTGACCAGAGTAGACGCGATCTGCCAGAAGTACGACAAATATGATGTAGAGAAGCAGAGAGATCTCAATGTCTCTGGTGACGATGCTTTCGCTCGACTCTATGCCACCGTCGAAGCCGACATTGAAACCGCTCTCCAGAAAGCGGAGGATGCTTCCAGAGAGAAGAATAGGGCATCGGTTGTGGCGTTGAATGCGGAGATTCGTCATACCAAGGCTCGATTACTAGAGGAGATCCCCAAGTTGCAGAGATTAGCTGTAAAGAGGATTAAAGGACTATCAACTGAAGATCTTACCACTAGAAATGATTTGGTGCTTGCATTGCCGGATAGGATTCAAGCTATACCAGATGGAACTACTTCTTCCTCAAAGAAGAATGGGGGTTGGAACTCCTCAACTTCACGTGCTGAAATCAAATTTGACTCGGATGGGCGATTTGATAATGAGTACTTCCAACACACTGAGGAGTCGAGTCAATTCAGACAAGAGTATGAAATGCGGAAAATGAAGCAGGATCAAGGATTAGACATGATATCAGAGGGGTTGGATACTCTGAAGAACATGGCGCATGATATGAATGAGGAAATAGACAGGCAAGTTCCTTTGATGGACGAGATTGACACTAAGGTGGACAAGGCTGCATCTGACCTTAAGAACACCAACGTTAGATTAAGGGACACAGTTAACCAGGTTTTGCTTTGTTCCTCTAATCTTCATTATTTAACCTTTGTTCTAAGGTCCAGCAGAAATTTCTGCATTGATATCATTTTGTTGTGTATAATCTTGGGTATTGCTGCCTATTTATACAATGTGTTGAAGAAGTGA 840 43.1 MSVIDLLTRVDAICQKYDKYDVEKQRDLNVSGDDAFARLYATVEADIETALQKAEDASREKNRASVVALNAEIRHTKARLLEEIPKLQRLAVKRIKGLSTEDLTTRNDLVLALPDRIQAIPDGTTSSSKKNGGWNSSTSRAEIKFDSDGRFDNEYFQHTEESSQFRQEYEMRKMKQDQGLDMISEGLDTLKNMAHDMNEEIDRQVPLMDEIDTKVDKAASDLKNTNVRLRDTVNQVLLCSSNLHYLTFVLRSSRNFCIDIILLCIILGIAAYLYNVLKK 279
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 848935 852582 + Carg03774-RA Car14g00181 160083
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g00181 279 MobiDBLite consensus disorder prediction 120 139 - -
Car14g00181 279 Coils Coil 40 60 - -
Car14g00181 279 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 170 232 IPR000727 -
Car14g00181 279 ProSitePatterns Syntaxin / epimorphin family signature. 176 215 IPR006012 GO:0005484|GO:0006886|GO:0016020
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car14g00181 Car-Chr14:848935 Car17g00563 Car-Chr17:5227173 1.88E-119 dispersed
Car01g00929 Car-Chr1:8979636 Car14g00181 Car-Chr14:848935 6.49E-168 transposed
Car14g00181 Car-Chr14:848935 Car20g00420 Car-Chr20:2360490 2.33E-82 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g00181 K08506 - csv:101215905 469.929