Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g00213 ATGCCGTTCCAGAGGATAGTAATCGCTGTCGGCCGGCCGGAGGAGGCCACCCATCCCGCCGCCCTGAAGGCCGCCTTGGCCGAGTTCATTTCCACTCTTATCTTCGTATTCGCCGGCCAAGGTTCGGGTCTTGCTTTCTCTAAACTCACCCATAATTCTCCCACCTCCCCTGCTGCCCTCATCATCGCTTCCTTAGCTCATGGCTTTGCCCTTTTCGTCGGAGTCTCCACCGGCGCCAACATCTCCGGCGGCCACCTCAACCCCGCCGTCACTTTCGGAGCCTTAGTAGGCGGAAACATCACCCTCCTCCGCGGCATTCTCTACTGGATAGCCCAGCTCCTCGGCGCTCTTGTCGCTAACTTGTTGCTTAAATTCGTCATCACGGACGTAGTAATTTCTGGATTCTCACTGTCAGCAGGGGTGGGAGTGTGGGAGGCGCTCGTATTCGAGATCGTAATGACATTCGGATTAGTGTACACAGTTTACGCCACCGCCATCGACCCCAAAAAGGGTGAGTTGGGAGTGATAGCACCCATCGCCATCGGGTTCATAGTGGCCGCCAACATTCTGGTGGGCGGCCCATTCACCGGCGCTTCCATGAACCCGGCCGTGGCCTTCGGACCCGCCGTCGTGGCTGGGTCTTGGGCCCAGCACTGGATCTACTGGGCCGGCCCACTGATTGGCGGCGGCTTGGCCGGCATTGTGTATGAGCTGTTCTTCATTGGGTTCACCCATGAGCCCCTCCCTGCCGCGGAGTACTAA 762 58.79 MPFQRIVIAVGRPEEATHPAALKAALAEFISTLIFVFAGQGSGLAFSKLTHNSPTSPAALIIASLAHGFALFVGVSTGANISGGHLNPAVTFGALVGGNITLLRGILYWIAQLLGALVANLLLKFVITDVVISGFSLSAGVGVWEALVFEIVMTFGLVYTVYATAIDPKKGELGVIAPIAIGFIVAANILVGGPFTGASMNPAVAFGPAVVAGSWAQHWIYWAGPLIGGGLAGIVYELFFIGFTHEPLPAAEY 253
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 1009026 1010696 - Carg03742-RA Car14g00213 160115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g00213 253 PANTHER AQUAPORIN-8 7 252 IPR034294 -
Car14g00213 253 PRINTS Major intrinsic protein family signature 23 42 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car14g00213 253 PRINTS Major intrinsic protein family signature 67 91 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car14g00213 253 PRINTS Major intrinsic protein family signature 104 123 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car14g00213 253 PRINTS Major intrinsic protein family signature 149 167 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car14g00213 253 PRINTS Major intrinsic protein family signature 182 204 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car14g00213 253 PRINTS Major intrinsic protein family signature 219 239 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car14g00213 253 CDD MIP 23 239 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car14g00213 253 Pfam Major intrinsic protein 16 236 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car14g00213 253 SUPERFAMILY Aquaporin-like 15 248 IPR023271 -
Car14g00213 253 PANTHER AQUAPORIN TIP1-1 7 252 - -
Car14g00213 253 Gene3D Glycerol uptake facilitator protein. 6 248 IPR023271 -
Car14g00213 253 ProSitePatterns MIP family signature. 85 93 IPR022357 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car03g01082 Car14g00213 CCT
Car07g00878 Car14g00213 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car08g00606 Car-Chr8:3926839 Car14g00213 Car-Chr14:1009026 5.07E-95 dispersed
Car12g00240 Car-Chr12:1610548 Car14g00213 Car-Chr14:1009026 4.22E-78 dispersed
Car13g00787 Car-Chr13:8691917 Car14g00213 Car-Chr14:1009026 1.90E-91 dispersed
Car14g00213 Car-Chr14:1009026 Car18g00101 Car-Chr18:544821 3.24E-83 dispersed
Car20g00676 Car-Chr20:3804975 Car14g00213 Car-Chr14:1009026 2.25E-21 transposed
Car14g00213 Car-Chr14:1009026 Car03g01082 Car-Chr3:8799843 2.08E-127 wgd
Car14g00213 Car-Chr14:1009026 Car07g00878 Car-Chr7:4717731 3.23E-127 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g00213 K09873 - csv:101222386 426.402