Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g00221 ATGAGGATCAGAACTAACTTCCTCTTTTGGCTCTGTTCTCTTCTCATTGTAGCTCTTTCCATCACCATTGCCCTGCGCTCATTCCCGCCTTCCTTGACTGCCATCCTCGCCGCTGTCCGTCCTCAAGACGGTGCTTTTGAGCTTGGCATTTTCAGCAGTCTAGCGAAAGCGAGTGGTTCGGATGATCTCTTGTCTCTTGTGACTCAAATTTCGTCCAAATACTATCAGTTGAAGCATAAAAAAAATTGTGATGAGAAGAAATGGAACTCTGAGTTGATATCTTTGTACAATGTTTCACTCACTTTGACAGTTGATTTGAAGGGATGTGCAAATTTTAGCACTGTGCAAAGCGCAGTGGACGCTGTTCCTGATCATGCCTCTTCAAGGACCCTTATCCTAATTGACTCTGGAATCTACAGGGAGAAGGTGGTGATAGAAGCCAACAAGACAAACTTGATAATTCAAGGCCAAGGCTACCTCAACACTTCAATAGAATGGAATGACACTGCCAATTCCACGGGAGGTACCACTTACAGTTCTTCAGTCACAATCTTTCCCTCAAACTTCATTGCCTTCAACATCAGCTTCAAAAACACAGCTCCACAGCCAAATCCAGGGACTGTTGGAGGACAAGCAGTGGCACTTCGAATTGTAGGAGATGAAGCTGCTTTCTATGGATGTGGGTTTTATGGAGCTCAAGACACACTCTATGATGACAAGGGAAGACATTACTTCAAAGAATGTTTCATTCAAGGGTCCATTGATTTCATCTTTGGCAATGCTCGATCGCTCTATGATGGTTGTAGCATCAAGTCAATAGCAAAGGAAATGGTGGATGGCGAGGTGAGTGGAGCCATCACAGCACAAGGAAGGCAAACAAGAATGGAGGAAACTGGTTTTGCCTTCATCAACTGCACCATCAATGGCTCTGGGAAGGTGTGGCTTGGCCGTGCCTGGGGCGTCTCTGCCACTGTCATCTTCTCTAAAACATACATGACCGACGTGGTGGCTGCTGACGGATGGAATGACTGGGGACACCCTTCAAGAGACGAGAGTGTGTTGTTTGGGGAATATGAATGCTCTGGAGAAGGAGCAAATCGCAGCTTGAGAGTGCCATATTCAAAGCAGCTGAATCAAGCGGAGGCTGAGCCATACATGGATGTTTCCTACATTGATGGAGATCAATGGCTGATCCATCAACAAATTACCCTTTTCTCTTCTATTTAA 1227 45.56 MRIRTNFLFWLCSLLIVALSITIALRSFPPSLTAILAAVRPQDGAFELGIFSSLAKASGSDDLLSLVTQISSKYYQLKHKKNCDEKKWNSELISLYNVSLTLTVDLKGCANFSTVQSAVDAVPDHASSRTLILIDSGIYREKVVIEANKTNLIIQGQGYLNTSIEWNDTANSTGGTTYSSSVTIFPSNFIAFNISFKNTAPQPNPGTVGGQAVALRIVGDEAAFYGCGFYGAQDTLYDDKGRHYFKECFIQGSIDFIFGNARSLYDGCSIKSIAKEMVDGEVSGAITAQGRQTRMEETGFAFINCTINGSGKVWLGRAWGVSATVIFSKTYMTDVVAADGWNDWGHPSRDESVLFGEYECSGEGANRSLRVPYSKQLNQAEAEPYMDVSYIDGDQWLIHQQITLFSSI 408
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 1045963 1047641 - Carg03734-RA Car14g00221 160123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g00221 408 ProSitePatterns Pectinesterase signature 2. 250 259 IPR033131 -
Car14g00221 408 Pfam Pectinesterase 103 394 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car14g00221 Car-Chr14:1045963 Car16g00445 Car-Chr16:2820554 3.30E-132 dispersed
Car17g00093 Car-Chr17:538421 Car14g00221 Car-Chr14:1045963 3.43E-71 dispersed
Car14g00221 Car-Chr14:1045963 Car11g00536 Car-Chr11:2899346 7.13E-102 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g00221 - - csv:101219157 662.144