Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g00234 ATGTCCGTTAGGCTTAAGTTAATTGGTCAGAGGGTTGTTAGTTTGATTGCAGCGGCGGACGATTTAGATGGAGAGACTGAGCTGTGTCGCTTCAGTGGCTCCAAGATATACCCAGGGAGGGGCATCAGATTTATCCGGGCTGATTCTCAGGTGTTCCTCTTTGCTAACTCAAAATGCAAGAGGTATTTCCACAACCGGTTGAAGCCTTCGAAGCTTACCTGGACAGCCATGTATAGGAAGCAGCATAAGAAGGATATTGCTCAAGAGGCGGTGAAGAAGAGGAGACGTACCACCAGGAAGCCATACTCGAGGTCCATTGTTGGTGCAACTTTGGAAGTCATCCAGAAGAAGAGAGCCGAAAAGCCAGAAGTGCGTGATGCTGCCAGAGAAGCTGCTCTGCGGGAAATTAAGGAAAGAATCAAGAAAACAAAGGACGAAAAGAAGGCCAAGAAAGCGGAAGTGTTAGCCAAGTCCCAGAAGGCACCAGGTAAGGGTAACGTTGCGAAGGGACCTGCATCCAAAGGTCCAAAGCTCGGTGGTGGCGGTGGGAAGCGTTGA 558 49.64 MSVRLKLIGQRVVSLIAAADDLDGETELCRFSGSKIYPGRGIRFIRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRTTRKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALREIKERIKKTKDEKKAKKAEVLAKSQKAPGKGNVAKGPASKGPKLGGGGGKR 185
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 1097428 1098947 + Carg03721-RA Car14g00234 160136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g00234 185 Pfam Ribosomal protein L24e 26 88 IPR000988 -
Car14g00234 185 ProSitePatterns Ribosomal protein L24e signature. 31 48 IPR023442 -
Car14g00234 185 Coils Coil 133 157 - -
Car14g00234 185 MobiDBLite consensus disorder prediction 139 185 - -
Car14g00234 185 MobiDBLite consensus disorder prediction 139 157 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car03g01068 Car14g00234 CCT
Car03g01068 Car14g00234 ECH
Car06g00369 Car14g00234 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car06g00390 Car-Chr6:2128973 Car14g00234 Car-Chr14:1097428 5.30E-19 dispersed
Car09g00141 Car-Chr9:681624 Car14g00234 Car-Chr14:1097428 3.05E-19 dispersed
Car14g00234 Car-Chr14:1097428 Car03g01068 Car-Chr3:8687817 9.06E-86 wgd
Car14g00234 Car-Chr14:1097428 Car06g00369 Car-Chr6:2032972 9.46E-90 wgd
Car14g00234 Car-Chr14:1097428 Car07g00854 Car-Chr7:4527553 2.04E-84 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g00234 K02896 - csv:101206122 245.358